RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 RAVER1Q8IY67 606 aaKnown RBP5.29□□□□□ -1.56
ZNF540-204ENST00000586792 CMTM4Q8IZR5 234 aa5.29□□□□□ -1.56
ZNF540-204ENST00000586792 ENAHQ8N8S7 591 aaPredicted RBP5.29□□□□□ -1.56
ZNF540-204ENST00000586792 CCDC89Q8N998 374 aa5.29□□□□□ -1.56
ZNF540-204ENST00000586792 BOLLQ8N9W6 283 aaKnown RBP5.29□□□□□ -1.56
ZNF540-204ENST00000586792 REPS2Q8NFH8 660 aa5.29□□□□□ -1.56
ZNF540-204ENST00000586792 MYRIPQ8NFW9 859 aa5.29□□□□□ -1.56
ZNF540-204ENST00000586792 CTCFLQ8NI51 663 aaPredicted RBP5.29□□□□□ -1.56
ZNF540-204ENST00000586792 SCARB1Q8WTV0 552 aa5.29□□□□□ -1.56
ZNF540-204ENST00000586792 NUP133Q8WUM0 1156 aa5.29□□□□□ -1.56
ZNF540-204ENST00000586792 MAP4K1Q92918 833 aa5.29□□□□□ -1.56
ZNF540-204ENST00000586792 PAWRQ96IZ0 340 aaKnown RBP5.29□□□□□ -1.56
ZNF540-204ENST00000586792 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.29□□□□□ -1.56
ZNF540-204ENST00000586792 WDR11Q9BZH6 1224 aa5.29□□□□□ -1.56
ZNF540-204ENST00000586792 IL25Q9H293 177 aa5.29□□□□□ -1.56
ZNF540-204ENST00000586792 RANBP17Q9H2T7 1088 aaKnown RBP5.29□□□□□ -1.56
ZNF540-204ENST00000586792 C11orf49Q9H6J7 331 aa5.29□□□□□ -1.56
ZNF540-204ENST00000586792 XPNPEP3Q9NQH7 507 aa5.29□□□□□ -1.56
ZNF540-204ENST00000586792 TESQ9UGI8 421 aaKnown RBP5.29□□□□□ -1.56
ZNF540-204ENST00000586792 EIF2B4Q9UI10 523 aaKnown RBP5.29□□□□□ -1.56
ZNF540-204ENST00000586792 KCNG1Q9UIX4 513 aa5.29□□□□□ -1.56
ZNF540-204ENST00000586792 MCM8Q9UJA3 840 aa5.29□□□□□ -1.56
ZNF540-204ENST00000586792 ATP8A1Q9Y2Q0 1164 aa5.29□□□□□ -1.56
ZNF540-204ENST00000586792 ABCB11O95342 1321 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 WDR19Q8NEZ3 1342 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 MYADML2A6NDP7 307 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 DNM1LO00429 736 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 ZNF185O15231 689 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 CALM1P0DP23 149 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 CALM2P0DP24 149 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 CALM3P0DP25 149 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 SNHG28P0DPA3 235 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 CYBAP13498 195 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 CALML3P27482 149 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 NOVP48745 357 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 DNM2P50570 870 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 SNAP25P60880 206 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 CDC37Q16543 378 aaPredicted RBP5.28□□□□□ -1.56
ZNF540-204ENST00000586792 ALFQ53S48 1182 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 INO80DQ53TQ3 878 aaPredicted RBP5.28□□□□□ -1.56
ZNF540-204ENST00000586792 ANO1Q5XXA6 986 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 CCDC62Q6P9F0 684 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 BTNL9Q6UXG8 535 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 CHST3Q7LGC8 479 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 CLEC14AQ86T13 490 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 SMAP1Q8IYB5 467 aaPredicted RBP5.28□□□□□ -1.56
ZNF540-204ENST00000586792 MYO1HQ8N1T3 1032 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 SLC7A14Q8TBB6 771 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 IPO4Q8TEX9 1081 aaKnown RBP5.28□□□□□ -1.56
ZNF540-204ENST00000586792 NKD2Q969F2 451 aaPredicted RBP5.28□□□□□ -1.56
ZNF540-204ENST00000586792 E2F7Q96AV8 911 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 SLC39A13Q96H72 371 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 FOXB1Q99853 325 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 KCNH6Q9H252 994 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 ABHD16BQ9H3Z7 469 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 PPCSQ9HAB8 311 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 IFT122Q9HBG6 1241 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 VAT1LQ9HCJ6 419 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 A1CFQ9NQ94 594 aaKnown RBP5.28□□□□□ -1.56
ZNF540-204ENST00000586792 ST7Q9NRC1 585 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 SYBUQ9NX95 663 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 FLRT1Q9NZU1 646 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 NCDNQ9UBB6 729 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 ZNF69Q9UC07 566 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 SEC63Q9UGP8 760 aaKnown RBP5.28□□□□□ -1.56
ZNF540-204ENST00000586792 OGDHLQ9ULD0 1010 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 RIPK3Q9Y572 518 aa5.28□□□□□ -1.56
ZNF540-204ENST00000586792 TMEM200CA6NKL6 621 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 KLRF2D3W0D1 207 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 RRP9O43818 475 aaKnown RBP5.27□□□□□ -1.57
ZNF540-204ENST00000586792 HKR1P10072 659 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 TYRP1P17643 537 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 HK1P19367 917 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 ZFP36P26651 326 aaKnown RBP5.27□□□□□ -1.57
ZNF540-204ENST00000586792 CXCR5P32302 372 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 CDKN1CP49918 316 aaPredicted RBP5.27□□□□□ -1.57
ZNF540-204ENST00000586792 GNAQP50148 359 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 ACVR2BQ13705 512 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 MUM1L1Q5H9M0 696 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 CT47A1Q5JQC4 288 aaPredicted RBP5.27□□□□□ -1.57
ZNF540-204ENST00000586792 PRAMEF19Q5SWL8 479 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 GJC2Q5T442 439 aaPredicted RBP5.27□□□□□ -1.57
ZNF540-204ENST00000586792 YOD1Q5VVQ6 348 aaPredicted RBP5.27□□□□□ -1.57
ZNF540-204ENST00000586792 CREB3L3Q68CJ9 461 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 CYB5R4Q7L1T6 521 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 ARMCX2Q7L311 632 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 SKAP1Q86WV1 359 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 NOSTRINQ8IVI9 506 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 ADGRF4Q8IZF3 695 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 ST13P5Q8NFI4 369 aaPredicted RBP5.27□□□□□ -1.57
ZNF540-204ENST00000586792 DIS3LQ8TF46 1054 aaKnown RBP5.27□□□□□ -1.57
ZNF540-204ENST00000586792 SNRNP27Q8WVK2 155 aaKnown RBP5.27□□□□□ -1.57
ZNF540-204ENST00000586792 ANKS1AQ92625 1134 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 NEK1Q96PY6 1258 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 SENP6Q9GZR1 1112 aaPredicted RBP5.27□□□□□ -1.57
ZNF540-204ENST00000586792 LSG1Q9H089 658 aaKnown RBP5.27□□□□□ -1.57
ZNF540-204ENST00000586792 TMEM260Q9NX78 707 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 CYP39A1Q9NYL5 469 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 MAGEL2Q9UJ55 1249 aa5.27□□□□□ -1.57
ZNF540-204ENST00000586792 FBXO2Q9UK22 296 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms