RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 SYNCQ9H7C4 482 aa20.13■□□□□ 0.81
DDX39A-204ENST00000586558 TRPC7Q9HCX4 862 aa20.13■□□□□ 0.81
DDX39A-204ENST00000586558 IGSF9Q9P2J2 1179 aa20.13■□□□□ 0.81
DDX39A-204ENST00000586558 NAGPAQ9UK23 515 aa20.13■□□□□ 0.81
DDX39A-204ENST00000586558 A0A1W2PQH9 124 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 C2orf78A6NCI8 922 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 MFAP3LO75121 409 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 OLFM2O95897 454 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 SERPING1P05155 500 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 CKMP06732 381 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 YWHAGP61981 247 aaKnown RBP eCLIP20.12■□□□□ 0.81
DDX39A-204ENST00000586558 HTR4Q13639 388 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 TSR1Q2NL82 804 aaKnown RBP20.12■□□□□ 0.81
DDX39A-204ENST00000586558 PTPN20Q4JDL3 420 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 NAA35Q5VZE5 725 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 PPP1R2P3Q6NXS1 205 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 POTEHQ6S545 545 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 BHLHA9Q7RTU4 235 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 TADA2BQ86TJ2 420 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 ZDHHC17Q8IUH5 632 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 ARID3BQ8IVW6 561 aaPredicted RBP20.12■□□□□ 0.81
DDX39A-204ENST00000586558 DRC7Q8IY82 874 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 GOLGA1Q92805 767 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 TRIM62Q9BVG3 475 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 HAUS4Q9H6D7 363 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 KIF9Q9HAQ2 790 aa20.12■□□□□ 0.81
DDX39A-204ENST00000586558 DOCK8Q8NF50 2099 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 TLR5O60602 858 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 ECI2O75521 394 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 RALAP11233 206 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 HDCP19113 662 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 CDC25BP30305 580 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 GABRB2P47870 512 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 ZNF268Q14587 947 aaPredicted RBP20.11■□□□□ 0.81
DDX39A-204ENST00000586558 CLEC16AQ2KHT3 1053 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 TDRD12Q587J7 1177 aaKnown RBP20.11■□□□□ 0.81
DDX39A-204ENST00000586558 HGSNATQ68CP4 663 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 KLHDC10Q6PID8 442 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 VPS36Q86VN1 386 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 ERICH1Q86X53 443 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 SCUBE3Q8IX30 993 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 GJD3Q8N144 294 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 ELSPBP1Q96BH3 223 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 UHRF1Q96T88 793 aaPredicted RBP20.11■□□□□ 0.81
DDX39A-204ENST00000586558 NMUR1Q9HB89 426 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 ZFP14Q9HCL3 533 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 SEPT11Q9NVA2 429 aaKnown RBP20.11■□□□□ 0.81
DDX39A-204ENST00000586558 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.11■□□□□ 0.817e-9■□□□□ 9.8
DDX39A-204ENST00000586558 ZNHIT6Q9NWK9 470 aaKnown RBP20.11■□□□□ 0.81
DDX39A-204ENST00000586558 OBP2AQ9NY56 170 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 LIMD1Q9UGP4 676 aa20.11■□□□□ 0.81
DDX39A-204ENST00000586558 ZNF638Q14966 1978 aaKnown RBP20.1■□□□□ 0.81
DDX39A-204ENST00000586558 YJEFN3A6XGL0 299 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 AKR1B15C9JRZ8 316 aaPredicted RBP20.1■□□□□ 0.81
DDX39A-204ENST00000586558 E7ENQ6 273 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 PIK3R2O00459 728 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 PAPSS1O43252 624 aaPredicted RBP20.1■□□□□ 0.81
DDX39A-204ENST00000586558 TNFAIP3P21580 790 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 FCARP24071 287 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 NSFP46459 744 aaKnown RBP20.1■□□□□ 0.81
DDX39A-204ENST00000586558 PGFP49763 221 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 SLC7A9P82251 487 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 CENPCQ03188 943 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 TOGARAM2Q6ZUX3 1019 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 ZNF571Q7Z3V5 609 aaPredicted RBP20.1■□□□□ 0.81
DDX39A-204ENST00000586558 CELF5Q8N6W0 485 aaKnown RBP20.1■□□□□ 0.81
DDX39A-204ENST00000586558 ARL14EPQ8N8R7 260 aaPredicted RBP20.1■□□□□ 0.81
DDX39A-204ENST00000586558 CPA5Q8WXQ8 436 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 C18orf8Q96DM3 657 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 PCDHB18PQ96TA0 734 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 CCSER2Q9H7U1 834 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 ABCC13Q9NSE7 274 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 OLA1Q9NTK5 396 aaKnown RBP20.1■□□□□ 0.81
DDX39A-204ENST00000586558 ABHD10Q9NUJ1 306 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 TDP1Q9NUW8 608 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 OSER1Q9NX31 292 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 ARHGAP26Q9UNA1 814 aa20.1■□□□□ 0.81
DDX39A-204ENST00000586558 OBSL1O75147 1896 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 GOLGA6L3A6NEY3 463 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 DPYSL4O14531 572 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 COCHO43405 550 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 PRAMEF12O95522 483 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 ADCY5O95622 1261 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 LTFP02788 710 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 ERBB2P04626 1255 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 GLI1P08151 1106 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 UNGP13051 313 aaPredicted RBP20.09■□□□□ 0.81
DDX39A-204ENST00000586558 RARGP13631 454 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 MMP8P22894 467 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 SCNN1AP37088 669 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 BSPRYQ5W0U4 402 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 BTBD8Q5XKL5 378 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 PARM1Q6UWI2 310 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 BEND5Q7L4P6 421 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 FGF14Q92915 247 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 SLC22A12Q96S37 553 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 NACA2Q9H009 215 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 KCNK12Q9HB15 430 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 ASNSD1Q9NWL6 643 aa20.09■□□□□ 0.81
DDX39A-204ENST00000586558 NUMBLQ9Y6R0 609 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms