RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 C15orf59Q2T9L4 293 aaPredicted RBP21.4■■□□□ 1.02
ATG4D-204ENST00000586417 METTL23Q86XA0 190 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 CEP57Q86XR8 500 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 TDHQ8IZJ6 230 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 KCTD13Q8WZ19 329 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 PKMYT1Q99640 499 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 ACBD6Q9BR61 282 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 C17orf80Q9BSJ5 609 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 MED10Q9BTT4 135 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 PBX4Q9BYU1 374 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 PRO3102Q9H379 93 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 KRT82Q9NSB4 513 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 FAM53CQ9NYF3 392 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 SPG21Q9NZD8 308 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 PCDHB8Q9UN66 801 aa21.4■■□□□ 1.02
ATG4D-204ENST00000586417 RNF8O76064 485 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 KRT7P08729 469 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 FAM200BP0CF97 657 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 TYMPP19971 482 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 FNTAP49354 379 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 CDR1P51861 262 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 COPS2P61201 443 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 HADHQ16836 314 aaKnown RBP21.39■■□□□ 1.01
ATG4D-204ENST00000586417 RAB6CQ53S08 254 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 FAM171BQ6P995 826 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 CCDC137Q6PK04 289 aaKnown RBP21.39■■□□□ 1.01
ATG4D-204ENST00000586417 SPOCD1Q6ZMY3 1216 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 CYP4V2Q6ZWL3 525 aaPredicted RBP21.39■■□□□ 1.01
ATG4D-204ENST00000586417 ARCQ7LC44 396 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 CFAP57Q96MR6 1250 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 PEBP4Q96S96 227 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 TRIM51Q9BSJ1 452 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 RAB6CQ9H0N0 254 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 ZWILCHQ9H900 591 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 TMEM30AQ9NV96 361 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 R3HDM2Q9Y2K5 976 aaKnown RBP21.39■■□□□ 1.01
ATG4D-204ENST00000586417 PCDHB12Q9Y5F1 795 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 PCDHA11Q9Y5I1 949 aa21.39■■□□□ 1.01
ATG4D-204ENST00000586417 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.38■■□□□ 1.01
ATG4D-204ENST00000586417 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.38■■□□□ 1.01
ATG4D-204ENST00000586417 ARHGEF37A1IGU5 675 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 FAM187AA6NFU0 413 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 TRUB2O95900 331 aaKnown RBP21.38■■□□□ 1.01
ATG4D-204ENST00000586417 SLC8A3P57103 927 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 ADCY2Q08462 1091 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 ADCY1Q08828 1119 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 SMC1AQ14683 1233 aaKnown RBP21.38■■□□□ 1.01
ATG4D-204ENST00000586417 SMTNL2Q2TAL5 461 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 INTS6LQ5JSJ4 861 aaKnown RBP21.38■■□□□ 1.01
ATG4D-204ENST00000586417 RTP2Q5QGT7 225 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 JAMLQ86YT9 394 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 RNF168Q8IYW5 571 aaPredicted RBP21.38■■□□□ 1.01
ATG4D-204ENST00000586417 EIF1ADQ8N9N8 165 aaKnown RBP21.38■■□□□ 1.01
ATG4D-204ENST00000586417 KLHL23Q8NBE8 558 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 C1orf54Q8WWF1 131 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 TMEM169Q96HH4 297 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 SMOQ99835 787 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 AAASQ9NRG9 546 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 CHST7Q9NS84 486 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 NFU1Q9UMS0 254 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 hCG_1818297A0A087WSY0 165 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 FGF18O76093 207 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 FGFR3P22607 806 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 ECHS1P30084 290 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 BMPR1AP36894 532 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 CDKN2BP42772 138 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 CACNA2D1P54289 1103 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 MAP3K7CLP57077 242 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 ADIGQ0VDE8 80 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 KCNT1Q5JUK3 1230 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 OVOS1Q6IE37 1185 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 ZMIZ2Q8NF64 920 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 OR10T2Q8NGX3 314 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 IFT81Q8WYA0 676 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 MYLPFQ96A32 169 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 C11orf84Q9BUA3 381 aaPredicted RBP21.38■■□□□ 1.01
ATG4D-204ENST00000586417 DCLK3Q9C098 648 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 PCSK1NQ9UHG2 260 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 USP18Q9UMW8 372 aa21.38■■□□□ 1.01
ATG4D-204ENST00000586417 LRRD1A4D1F6 860 aa21.37■■□□□ 1.01
ATG4D-204ENST00000586417 AP1G2O75843 785 aa21.37■■□□□ 1.01
ATG4D-204ENST00000586417 KRT10P13645 584 aa21.37■■□□□ 1.01
ATG4D-204ENST00000586417 CTNNB1P35222 781 aa21.37■■□□□ 1.01
ATG4D-204ENST00000586417 CETN2P41208 172 aa21.37■■□□□ 1.01
ATG4D-204ENST00000586417 CASP8Q14790 479 aa21.37■■□□□ 1.01
ATG4D-204ENST00000586417 TAZQ16635 292 aa21.37■■□□□ 1.01
ATG4D-204ENST00000586417 ZFYVE27Q5T4F4 411 aa21.37■■□□□ 1.01
ATG4D-204ENST00000586417 HDXQ7Z353 690 aa21.37■■□□□ 1.01
ATG4D-204ENST00000586417 ATG4AQ8WYN0 398 aa21.37■■□□□ 1.01
ATG4D-204ENST00000586417 RUNDC3BQ96NL0 473 aa21.37■■□□□ 1.01
ATG4D-204ENST00000586417 SYN3O14994 580 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 SDC4P31431 198 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 PTPN9P43378 593 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 KCNJ1P48048 391 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 YWHAHQ04917 246 aaPredicted RBP21.36■■□□□ 1.01
ATG4D-204ENST00000586417 CUL1Q13616 776 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 VARS2Q5ST30 1063 aaKnown RBP21.36■■□□□ 1.01
ATG4D-204ENST00000586417 DUPD1Q68J44 220 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 EMBQ6PCB8 327 aa21.36■■□□□ 1.01
ATG4D-204ENST00000586417 DDX42Q86XP3 938 aaKnown RBP eCLIP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms