RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 EOGTQ5NDL2 527 aa18.02■□□□□ 0.48
MBD3-204ENST00000585967 KRBA2Q6ZNG9 492 aa18.02■□□□□ 0.48
MBD3-204ENST00000585967 CNOT6LQ96LI5 555 aaKnown RBP18.02■□□□□ 0.48
MBD3-204ENST00000585967 NIF3L1Q9GZT8 377 aa18.02■□□□□ 0.48
MBD3-204ENST00000585967 CSNK1G1Q9HCP0 422 aa18.02■□□□□ 0.48
MBD3-204ENST00000585967 PNPLA8Q9NP80 782 aa18.02■□□□□ 0.48
MBD3-204ENST00000585967 ARHGEF4Q9NR80 690 aa18.02■□□□□ 0.48
MBD3-204ENST00000585967 TMEM30AQ9NV96 361 aa18.02■□□□□ 0.48
MBD3-204ENST00000585967 RMND1Q9NWS8 449 aa18.02■□□□□ 0.48
MBD3-204ENST00000585967 IL37Q9NZH6 218 aa18.02■□□□□ 0.48
MBD3-204ENST00000585967 PCDHA5Q9Y5H7 936 aa18.02■□□□□ 0.48
MBD3-204ENST00000585967 DCDC2BA2VCK2 349 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 GOLGA6L4A6NEF3 574 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 TNFRSF10BO14763 440 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 ZBTB24O43167 697 aaPredicted RBP18.01■□□□□ 0.47
MBD3-204ENST00000585967 TLR5O60602 858 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 CCDC130P13994 396 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 GTF2H1P32780 548 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 ASPAP45381 313 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 PSEN1P49768 467 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 MAP3K7CLP57077 242 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 ZXDBP98169 803 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 DPYDQ12882 1025 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 BYSLQ13895 437 aaKnown RBP18.01■□□□□ 0.47
MBD3-204ENST00000585967 PLK5Q496M5 336 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 NAIF1Q69YI7 327 aaPredicted RBP18.01■□□□□ 0.47
MBD3-204ENST00000585967 SCAMP5Q8TAC9 235 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 KCNV2Q8TDN2 545 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 FAXDC2Q96IV6 333 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 CDK5RAP1Q96SZ6 601 aaKnown RBP18.01■□□□□ 0.47
MBD3-204ENST00000585967 GTPBP4Q9BZE4 634 aaKnown RBP18.01■□□□□ 0.47
MBD3-204ENST00000585967 FAM124BQ9H5Z6 455 aaPredicted RBP18.01■□□□□ 0.47
MBD3-204ENST00000585967 TMEM8AQ9HCN3 771 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.01■□□□□ 0.473e-6■■■■■ 78.8
MBD3-204ENST00000585967 FAM49BQ9NUQ9 324 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 GMIPQ9P107 970 aa18.01■□□□□ 0.47
MBD3-204ENST00000585967 CHORDC1Q9UHD1 332 aaPredicted RBP18.01■□□□□ 0.47
MBD3-204ENST00000585967 TNRC6BQ9UPQ9 1833 aaKnown RBP18■□□□□ 0.47
MBD3-204ENST00000585967 K7EQS6 105 aa18■□□□□ 0.47
MBD3-204ENST00000585967 ZDHHC11BP0C7U3 371 aa18■□□□□ 0.47
MBD3-204ENST00000585967 EPB41P11171 864 aaKnown RBP18■□□□□ 0.47
MBD3-204ENST00000585967 ADORA2BP29275 332 aa18■□□□□ 0.47
MBD3-204ENST00000585967 ATP5C1P36542 298 aaKnown RBP18■□□□□ 0.47
MBD3-204ENST00000585967 TNFRSF4P43489 277 aa18■□□□□ 0.47
MBD3-204ENST00000585967 SLC8A3P57103 927 aa18■□□□□ 0.47
MBD3-204ENST00000585967 ADAM9Q13443 819 aa18■□□□□ 0.47
MBD3-204ENST00000585967 CRY1Q16526 586 aa18■□□□□ 0.47
MBD3-204ENST00000585967 ANO4Q32M45 955 aa18■□□□□ 0.47
MBD3-204ENST00000585967 EDRF1Q3B7T1 1238 aa18■□□□□ 0.47
MBD3-204ENST00000585967 LY6G5CQ5SRR4 150 aa18■□□□□ 0.47
MBD3-204ENST00000585967 KRT39Q6A163 491 aa18■□□□□ 0.47
MBD3-204ENST00000585967 ANO7Q6IWH7 933 aa18■□□□□ 0.47
MBD3-204ENST00000585967 WHAMMQ8TF30 809 aa18■□□□□ 0.47
MBD3-204ENST00000585967 EZH1Q92800 747 aaPredicted RBP18■□□□□ 0.47
MBD3-204ENST00000585967 XPO6Q96QU8 1125 aaKnown RBP18■□□□□ 0.47
MBD3-204ENST00000585967 HNRNPABQ99729 332 aaKnown RBP18■□□□□ 0.47
MBD3-204ENST00000585967 SDCBP2Q9H190 292 aa18■□□□□ 0.47
MBD3-204ENST00000585967 CCSER2Q9H7U1 834 aa18■□□□□ 0.47
MBD3-204ENST00000585967 BCCIPQ9P287 314 aaKnown RBP eCLIP18■□□□□ 0.47
MBD3-204ENST00000585967 DEC1Q9P2X7 70 aa18■□□□□ 0.47
MBD3-204ENST00000585967 HOOK1Q9UJC3 728 aaKnown RBP18■□□□□ 0.47
MBD3-204ENST00000585967 HOXC11O43248 304 aaPredicted RBP17.99■□□□□ 0.47
MBD3-204ENST00000585967 DPP6P42658 865 aa17.99■□□□□ 0.47
MBD3-204ENST00000585967 GCLMP48507 274 aa17.99■□□□□ 0.47
MBD3-204ENST00000585967 CREB5Q02930 508 aa17.99■□□□□ 0.47
MBD3-204ENST00000585967 KDSRQ06136 332 aa17.99■□□□□ 0.47
MBD3-204ENST00000585967 PPM1JQ5JR12 505 aa17.99■□□□□ 0.47
MBD3-204ENST00000585967 RHBDF2Q6PJF5 856 aa17.99■□□□□ 0.47
MBD3-204ENST00000585967 PAQR9Q6ZVX9 377 aa17.99■□□□□ 0.47
MBD3-204ENST00000585967 RASSF3Q86WH2 238 aa17.99■□□□□ 0.47
MBD3-204ENST00000585967 TTC30AQ86WT1 665 aa17.99■□□□□ 0.47
MBD3-204ENST00000585967 CYFIP2Q96F07 1278 aa17.99■□□□□ 0.47
MBD3-204ENST00000585967 TSG101Q99816 390 aa17.99■□□□□ 0.47
MBD3-204ENST00000585967 SMOQ99835 787 aa17.99■□□□□ 0.47
MBD3-204ENST00000585967 DUSP15Q9H1R2 295 aaPredicted RBP17.99■□□□□ 0.47
MBD3-204ENST00000585967 MMRN2Q9H8L6 949 aa17.99■□□□□ 0.47
MBD3-204ENST00000585967 SCML2Q9UQR0 700 aa17.99■□□□□ 0.47
MBD3-204ENST00000585967 EPG5Q9HCE0 2579 aa17.99■□□□□ 0.47
MBD3-204ENST00000585967 CHD8Q9HCK8 2581 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 CACNA1BQ00975 2339 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 TBC1D3BA6NDS4 549 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 SCAMP3O14828 347 aaKnown RBP17.98■□□□□ 0.47
MBD3-204ENST00000585967 CETN3O15182 167 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 ZNF202O95125 648 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 TRIM49P0CI25 452 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 TRIM49CP0CI26 452 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 IRF1P10914 325 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 MXI1P50539 228 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 BECN1Q14457 450 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 PLA2G2CQ5R387 149 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 SPOPLQ6IQ16 392 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 CLEC20AQ6ZU45 233 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 CCDC33Q8N5R6 958 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 TXNDC5Q8NBS9 432 aaKnown RBP17.98■□□□□ 0.47
MBD3-204ENST00000585967 ZFRQ96KR1 1074 aaKnown RBP17.98■□□□□ 0.47
MBD3-204ENST00000585967 TPSD1Q9BZJ3 242 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 CYLDQ9NQC7 956 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 SPHK2Q9NRA0 654 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 WDR35Q9P2L0 1181 aa17.98■□□□□ 0.47
MBD3-204ENST00000585967 HMGXB4Q9UGU5 601 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms