RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 NGRNQ9NPE2 291 aaKnown RBP11.76□□□□□ -0.53
LIG3-204ENST00000585740 CDH9Q9ULB4 789 aa11.76□□□□□ -0.53
LIG3-204ENST00000585740 NOD1Q9Y239 953 aa11.76□□□□□ -0.53
LIG3-204ENST00000585740 PTCH2Q9Y6C5 1203 aa11.76□□□□□ -0.53
LIG3-204ENST00000585740 A0A0C4DFX4 3053 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 RANBP2P49792 3224 aaKnown RBP11.75□□□□□ -0.53
LIG3-204ENST00000585740 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.75□□□□□ -0.53
LIG3-204ENST00000585740 TULP2O00295 520 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 PIK3R2O00459 728 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 APOL1O14791 398 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 GRAP2O75791 330 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 ZNF189O75820 626 aaPredicted RBP11.75□□□□□ -0.53
LIG3-204ENST00000585740 GNRH1P01148 92 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 SHBGP04278 402 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 FAM200BP0CF97 657 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 LCP1P13796 627 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 PCSK1P29120 753 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 HPDP32754 393 aaPredicted RBP11.75□□□□□ -0.53
LIG3-204ENST00000585740 CHKAP35790 457 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 MLH1P40692 756 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 ATP1A2P50993 1020 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 MAGOHP61326 146 aaKnown RBP11.75□□□□□ -0.53
LIG3-204ENST00000585740 DYNLT1P63172 113 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 ATP11AP98196 1134 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 ROR1Q01973 937 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 DSC3Q14574 896 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 CDO1Q16878 200 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 ERMARDQ5T6L9 678 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 RNASEH2BQ5TBB1 312 aaKnown RBP11.75□□□□□ -0.53
LIG3-204ENST00000585740 SCYL2Q6P3W7 929 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 FAM43BQ6ZT52 329 aaPredicted RBP11.75□□□□□ -0.53
LIG3-204ENST00000585740 CYP4V2Q6ZWL3 525 aaPredicted RBP11.75□□□□□ -0.53
LIG3-204ENST00000585740 CENPUQ71F23 418 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 METTL23Q86XA0 190 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 SCUBE3Q8IX30 993 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 PPIL6Q8IXY8 311 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 P3H4Q92791 437 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 CENPTQ96BT3 561 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 HAUS1Q96CS2 278 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 FAF2Q96CS3 445 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 CFAP57Q96MR6 1250 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 GAD1Q99259 594 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 TSEN34Q9BSV6 310 aaKnown RBP11.75□□□□□ -0.53
LIG3-204ENST00000585740 MED10Q9BTT4 135 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 ADAM7Q9H2U9 754 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 LRRC4Q9HBW1 653 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 PCDH18Q9HCL0 1135 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 NINJ2Q9NZG7 142 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 RCOR3Q9P2K3 495 aaPredicted RBP11.75□□□□□ -0.53
LIG3-204ENST00000585740 SRRDQ9UH36 339 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 DDX20Q9UHI6 824 aaKnown RBP11.75□□□□□ -0.53
LIG3-204ENST00000585740 DSEQ9UL01 958 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 PADI3Q9ULW8 664 aa11.75□□□□□ -0.53
LIG3-204ENST00000585740 A0A087WUV0 522 aaPredicted RBP11.74□□□□□ -0.53
LIG3-204ENST00000585740 A0A0U1RQF3 1178 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 TLDC2A0PJX2 215 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 ARL5CA6NH57 179 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 MOXD2PA6NHM9 499 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 IFNB1P01574 187 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 CD48P09326 243 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 RBP3P10745 1247 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 ODC1P11926 461 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 TSHRP16473 764 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 CCND3P30281 292 aaPredicted RBP11.74□□□□□ -0.53
LIG3-204ENST00000585740 MATKP42679 507 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 MAGEA4P43358 317 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 GRIK3Q13003 919 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 TRIM32Q13049 653 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 ITGA7Q13683 1181 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 ARHGEF6Q15052 776 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 DPYSL2Q16555 572 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 ANKRD20A8PQ5CZ79 823 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 MAP3K21Q5TCX8 1036 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 WSCD1Q658N2 575 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 SLC9A4Q6AI14 798 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 DARS2Q6PI48 645 aaKnown RBP11.74□□□□□ -0.53
LIG3-204ENST00000585740 PPP1R21Q6ZMI0 780 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 AGMOQ6ZNB7 445 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 PIGZQ86VD9 579 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 FUKQ8N0W3 1084 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 SIX6OS1Q8N1H7 587 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 GSTCDQ8NEC7 633 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 DPF3Q92784 378 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 WNT8BQ93098 351 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 PIWIL1Q96J94 861 aaKnown RBP11.74□□□□□ -0.53
LIG3-204ENST00000585740 ZFP42Q96MM3 310 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 RBM15Q96T37 977 aaKnown RBP eCLIP11.74□□□□□ -0.53
LIG3-204ENST00000585740 SYT15Q9BQS2 421 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 TMEM121Q9BTD3 319 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 C11orf84Q9BUA3 381 aaPredicted RBP11.74□□□□□ -0.53
LIG3-204ENST00000585740 SNRNP25Q9BV90 132 aaKnown RBP11.74□□□□□ -0.53
LIG3-204ENST00000585740 SEZ6LQ9BYH1 1024 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 FRMD8Q9BZ67 464 aaPredicted RBP11.74□□□□□ -0.53
LIG3-204ENST00000585740 RNF19AQ9NV58 838 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 DDX43Q9NXZ2 648 aaKnown RBP11.74□□□□□ -0.53
LIG3-204ENST00000585740 STAP1Q9ULZ2 295 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 GRIN2DO15399 1336 aa11.74□□□□□ -0.53
LIG3-204ENST00000585740 H7C0C1 242 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 ALOX15BO15296 676 aa11.73□□□□□ -0.53
LIG3-204ENST00000585740 INPPL1O15357 1258 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms