RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 SDC4P31431 198 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 BMPR1AP36894 532 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 PTPN9P43378 593 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 DSC1Q08554 894 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 ZNF252P-AS1Q0IIN9 211 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 TIGD5Q53EQ6 642 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 TMEM31Q5JXX7 168 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 ZFYVE27Q5T4F4 411 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 PTCRAQ6ISU1 281 aaPredicted RBP10.88□□□□□ -0.67
LIG3-203ENST00000585370 DRICH1Q6PGQ1 229 aaPredicted RBP10.88□□□□□ -0.67
LIG3-203ENST00000585370 OLFML1Q6UWY5 402 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 VSIG1Q86XK7 387 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 MAP7D3Q8IWC1 876 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 CCDC105Q8IYK2 499 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 FUKQ8N0W3 1084 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 GJD3Q8N144 294 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 CRIPAKQ8N1N5 446 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 FIBCD1Q8N539 461 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 TTC13Q8NBP0 860 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 CMASQ8NFW8 434 aaPredicted RBP10.88□□□□□ -0.67
LIG3-203ENST00000585370 ATL2Q8NHH9 583 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 JOSD2Q8TAC2 188 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 MYCBPAPQ8TBZ2 947 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 AENQ8WTP8 325 aaKnown RBP10.88□□□□□ -0.67
LIG3-203ENST00000585370 RXFP2Q8WXD0 754 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 LINC01599Q8WXQ3 324 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 ZNF689Q96CS4 500 aaPredicted RBP10.88□□□□□ -0.67
LIG3-203ENST00000585370 PABPC5Q96DU9 382 aaKnown RBP10.88□□□□□ -0.67
LIG3-203ENST00000585370 SLITRK1Q96PX8 696 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 TBCBQ99426 244 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 ERP44Q9BS26 406 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 MED10Q9BTT4 135 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 NSUN3Q9H649 340 aaKnown RBP10.88□□□□□ -0.67
LIG3-203ENST00000585370 TMEM51Q9NW97 253 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 AMACRQ9UHK6 382 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 PCDHB8Q9UN66 801 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 INPP5FQ9Y2H2 1132 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 COL4A6Q14031 1691 aa10.88□□□□□ -0.67
LIG3-203ENST00000585370 NLRC5Q86WI3 1866 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 FAM86C2PA6NEL3 165 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 NDC80O14777 642 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 GRM6O15303 877 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 PAPSS1O43252 624 aaPredicted RBP10.87□□□□□ -0.67
LIG3-203ENST00000585370 LRCH4O75427 683 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 DGKIO75912 1065 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 SEC31AO94979 1220 aaKnown RBP10.87□□□□□ -0.67
LIG3-203ENST00000585370 GJB6O95452 261 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 TRUB2O95900 331 aaKnown RBP10.87□□□□□ -0.67
LIG3-203ENST00000585370 GAS8O95995 478 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 KRT1P04264 644 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 RB1P06400 928 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 CCDC130P13994 396 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 CTNNB1P35222 781 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 LTBRP36941 435 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 PLA2G5P39877 138 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 RGS7P49802 495 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 AFF1P51825 1210 aaKnown RBP10.87□□□□□ -0.67
LIG3-203ENST00000585370 TSPY1Q01534 308 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 KLF1Q13351 362 aaPredicted RBP10.87□□□□□ -0.67
LIG3-203ENST00000585370 PDK2Q15119 407 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 SIX1Q15475 284 aaPredicted RBP10.87□□□□□ -0.67
LIG3-203ENST00000585370 TFDP3Q5H9I0 405 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 FAM171BQ6P995 826 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 CCDC137Q6PK04 289 aaKnown RBP10.87□□□□□ -0.67
LIG3-203ENST00000585370 SPOCD1Q6ZMY3 1216 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 CPNE8Q86YQ8 564 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 ABI1Q8IZP0 508 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 SCML4Q8N228 414 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 TEKT4Q8WW24 435 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 IFT81Q8WYA0 676 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 CLP1Q92989 425 aaKnown RBP10.87□□□□□ -0.67
LIG3-203ENST00000585370 DDX23Q9BUQ8 820 aaKnown RBP10.87□□□□□ -0.67
LIG3-203ENST00000585370 MRPL9Q9BYD2 267 aaKnown RBP10.87□□□□□ -0.67
LIG3-203ENST00000585370 PRDM16Q9HAZ2 1276 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 LRRC4Q9HBW1 653 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 FAM53CQ9NYF3 392 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 RRN3Q9NYV6 651 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 LRFN2Q9ULH4 789 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 DRG1Q9Y295 367 aaKnown RBP10.87□□□□□ -0.67
LIG3-203ENST00000585370 MUC6Q6W4X9 2439 aa10.87□□□□□ -0.67
LIG3-203ENST00000585370 CARNS1A5YM72 827 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 ZNF487B1APH4 448 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 SYN3O14994 580 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 TTI1O43156 1089 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 PRPSAP2O60256 369 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 HSF2BPO75031 334 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 ZMYND10O75800 440 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 ECEL1O95672 775 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 RALAP11233 206 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 MIPP30301 263 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 PTGIRP43119 386 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 SLC25A11Q02978 314 aaKnown RBP10.86□□□□□ -0.67
LIG3-203ENST00000585370 RNASELQ05823 741 aaKnown RBP10.86□□□□□ -0.67
LIG3-203ENST00000585370 ELAVL2Q12926 359 aaKnown RBP10.86□□□□□ -0.67
LIG3-203ENST00000585370 CAMK1Q14012 370 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 BTG3Q14201 252 aaPredicted RBP10.86□□□□□ -0.67
LIG3-203ENST00000585370 CASP8Q14790 479 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 TAZQ16635 292 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 CTC1Q2NKJ3 1217 aa10.86□□□□□ -0.67
LIG3-203ENST00000585370 PUS10Q3MIT2 529 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms