RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 BAHD1Q8TBE0 780 aaPredicted RBP19.27■□□□□ 0.68
TOP3A-220ENST00000585031 IPO4Q8TEX9 1081 aaKnown RBP19.27■□□□□ 0.68
TOP3A-220ENST00000585031 FAM124BQ9H5Z6 455 aaPredicted RBP19.27■□□□□ 0.68
TOP3A-220ENST00000585031 ITGA11Q9UKX5 1188 aa19.27■□□□□ 0.68
TOP3A-220ENST00000585031 CDH9Q9ULB4 789 aa19.27■□□□□ 0.68
TOP3A-220ENST00000585031 RAD54BQ9Y620 910 aa19.27■□□□□ 0.68
TOP3A-220ENST00000585031 KNTC1P50748 2209 aa19.27■□□□□ 0.67
TOP3A-220ENST00000585031 MGAQ8IWI9 3026 aa19.26■□□□□ 0.67
TOP3A-220ENST00000585031 HOXC11O43248 304 aaPredicted RBP19.26■□□□□ 0.67
TOP3A-220ENST00000585031 COCHO43405 550 aa19.26■□□□□ 0.67
TOP3A-220ENST00000585031 KRT18P05783 430 aaKnown RBP19.26■□□□□ 0.67
TOP3A-220ENST00000585031 PLA2G2AP14555 144 aa19.26■□□□□ 0.67
TOP3A-220ENST00000585031 GAD2Q05329 585 aa19.26■□□□□ 0.67
TOP3A-220ENST00000585031 DBX2Q6ZNG2 339 aa19.26■□□□□ 0.67
TOP3A-220ENST00000585031 BBS7Q8IWZ6 715 aa19.26■□□□□ 0.67
TOP3A-220ENST00000585031 OR5B17Q8NGF7 314 aa19.26■□□□□ 0.67
TOP3A-220ENST00000585031 ZDHHC5Q9C0B5 715 aa19.26■□□□□ 0.67
TOP3A-220ENST00000585031 RBAKQ9NYW8 714 aaPredicted RBP19.26■□□□□ 0.67
TOP3A-220ENST00000585031 DEC1Q9P2X7 70 aa19.26■□□□□ 0.67
TOP3A-220ENST00000585031 STARD13Q9Y3M8 1113 aa19.26■□□□□ 0.67
TOP3A-220ENST00000585031 MYH10P35580 1976 aa19.26■□□□□ 0.67
TOP3A-220ENST00000585031 NUMA1Q14980 2115 aa19.25■□□□□ 0.67
TOP3A-220ENST00000585031 ATMQ13315 3056 aa19.25■□□□□ 0.67
TOP3A-220ENST00000585031 E2F8A0AVK6 867 aa19.25■□□□□ 0.67
TOP3A-220ENST00000585031 WASH3PC4AMC7 463 aa19.25■□□□□ 0.67
TOP3A-220ENST00000585031 PRRT4C9JH25 899 aa19.25■□□□□ 0.67
TOP3A-220ENST00000585031 ATXN7O15265 892 aaPredicted RBP19.25■□□□□ 0.67
TOP3A-220ENST00000585031 TBCAO75347 108 aaKnown RBP19.25■□□□□ 0.67
TOP3A-220ENST00000585031 RBP5P82980 135 aa19.25■□□□□ 0.67
TOP3A-220ENST00000585031 IFRD2Q12894 506 aaPredicted RBP19.25■□□□□ 0.67
TOP3A-220ENST00000585031 ARL6IP4Q66PJ3 421 aaKnown RBP19.25■□□□□ 0.67
TOP3A-220ENST00000585031 LSM14AQ8ND56 463 aaKnown RBP19.25■□□□□ 0.67
TOP3A-220ENST00000585031 MYCBPAPQ8TBZ2 947 aa19.25■□□□□ 0.67
TOP3A-220ENST00000585031 CACTINQ8WUQ7 758 aaKnown RBP19.25■□□□□ 0.67
TOP3A-220ENST00000585031 MRGPRX1Q96LB2 322 aa19.25■□□□□ 0.67
TOP3A-220ENST00000585031 C8orf48Q96LL4 319 aa19.25■□□□□ 0.67
TOP3A-220ENST00000585031 CEP295NLQ96MC4 621 aa19.25■□□□□ 0.67
TOP3A-220ENST00000585031 FGFBP2Q9BYJ0 223 aa19.25■□□□□ 0.67
TOP3A-220ENST00000585031 SPHK2Q9NRA0 654 aa19.25■□□□□ 0.67
TOP3A-220ENST00000585031 TBC1D14Q9P2M4 693 aa19.25■□□□□ 0.67
TOP3A-220ENST00000585031 ZNF217O75362 1048 aa19.24■□□□□ 0.67
TOP3A-220ENST00000585031 PPP3CCP48454 512 aa19.24■□□□□ 0.67
TOP3A-220ENST00000585031 PGFP49763 221 aa19.24■□□□□ 0.67
TOP3A-220ENST00000585031 CASP5P51878 434 aa19.24■□□□□ 0.67
TOP3A-220ENST00000585031 POSTNQ15063 836 aa19.24■□□□□ 0.67
TOP3A-220ENST00000585031 RILPL1Q5EBL4 403 aa19.24■□□□□ 0.67
TOP3A-220ENST00000585031 MDH1BQ5I0G3 518 aa19.24■□□□□ 0.67
TOP3A-220ENST00000585031 TRMT11Q7Z4G4 463 aaKnown RBP19.24■□□□□ 0.67
TOP3A-220ENST00000585031 SPRYD3Q8NCJ5 442 aa19.24■□□□□ 0.67
TOP3A-220ENST00000585031 SETD7Q8WTS6 366 aaKnown RBP19.24■□□□□ 0.67
TOP3A-220ENST00000585031 P2RY11Q96G91 374 aa19.24■□□□□ 0.67
TOP3A-220ENST00000585031 GABRG3Q99928 467 aa19.24■□□□□ 0.67
TOP3A-220ENST00000585031 MRPL45Q9BRJ2 306 aaKnown RBP19.24■□□□□ 0.67
TOP3A-220ENST00000585031 CBWD1Q9BRT8 395 aa19.24■□□□□ 0.67
TOP3A-220ENST00000585031 TBC1D7Q9P0N9 293 aa19.24■□□□□ 0.67
TOP3A-220ENST00000585031 SUSD2Q9UGT4 822 aa19.24■□□□□ 0.67
TOP3A-220ENST00000585031 CHORDC1Q9UHD1 332 aaPredicted RBP19.24■□□□□ 0.67
TOP3A-220ENST00000585031 FNDC3AQ9Y2H6 1198 aaKnown RBP19.24■□□□□ 0.67
TOP3A-220ENST00000585031 PTPRQQ9UMZ3 2332 aa19.24■□□□□ 0.67
TOP3A-220ENST00000585031 FAM149AA5PLN7 773 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 CLDN5O00501 218 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 GREM1O60565 184 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 ZNF883P0CG24 379 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 WARSP23381 471 aaKnown RBP19.23■□□□□ 0.67
TOP3A-220ENST00000585031 ANXA13P27216 316 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 RABEP1Q15276 862 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 ANO4Q32M45 955 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 MCTP1Q6DN14 999 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 DPH6Q7L8W6 267 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 DYMQ7RTS9 669 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 HSCBQ8IWL3 235 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 DNASE2BQ8WZ79 361 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 CALML4Q96GE6 196 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 HPDLQ96IR7 371 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 AK8Q96MA6 479 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 ZNF518BQ9C0D4 1074 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 DPEP3Q9H4B8 488 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 PCIF1Q9H4Z3 704 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 CCSER2Q9H7U1 834 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 BTBD3Q9Y2F9 522 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 RAI2Q9Y5P3 530 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 SLCO1B1Q9Y6L6 691 aa19.23■□□□□ 0.67
TOP3A-220ENST00000585031 KCNJ18B7U540 433 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 TRIM66O15016 1216 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 SLC26A4O43511 780 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 NDUFS2O75306 463 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 GNSP15586 552 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 ABCD1P33897 745 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 DDIT3P35638 169 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 UBA7P41226 1012 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 SYCP2LQ5T4T6 812 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 TDRD10Q5VZ19 366 aaKnown RBP19.22■□□□□ 0.67
TOP3A-220ENST00000585031 BTBD8Q5XKL5 378 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 USP49Q70CQ1 688 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 ZNF605Q86T29 641 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 DDX42Q86XP3 938 aaKnown RBP eCLIP19.22■□□□□ 0.67
TOP3A-220ENST00000585031 CHPFQ8IZ52 775 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 ZCCHC9Q8N567 271 aaKnown RBP19.22■□□□□ 0.67
TOP3A-220ENST00000585031 SCAMP5Q8TAC9 235 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 LARP4BQ92615 738 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms