RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-229ENST00000584754 ZNF527Q8NB42 609 aa4.3□□□□□ -1.72
PPP4R1-229ENST00000584754 FAM98AQ8NCA5 519 aaKnown RBP4.3□□□□□ -1.72
PPP4R1-229ENST00000584754 PSD4Q8NDX1 1056 aa4.3□□□□□ -1.72
PPP4R1-229ENST00000584754 VPS37AQ8NEZ2 397 aa4.3□□□□□ -1.72
PPP4R1-229ENST00000584754 POC1BQ8TC44 478 aa4.3□□□□□ -1.72
PPP4R1-229ENST00000584754 ZNF384Q8TF68 577 aa4.3□□□□□ -1.72
PPP4R1-229ENST00000584754 POF1BQ8WVV4 589 aa4.3□□□□□ -1.72
PPP4R1-229ENST00000584754 SMURF2Q9HAU4 748 aa4.3□□□□□ -1.72
PPP4R1-229ENST00000584754 AGO4Q9HCK5 861 aaKnown RBP4.3□□□□□ -1.72
PPP4R1-229ENST00000584754 HEYLQ9NQ87 328 aaPredicted RBP4.3□□□□□ -1.72
PPP4R1-229ENST00000584754 STK32BQ9NY57 414 aa4.3□□□□□ -1.72
PPP4R1-229ENST00000584754 ETAA1Q9NY74 926 aa4.3□□□□□ -1.72
PPP4R1-229ENST00000584754 ITGB1BP2Q9UKP3 347 aa4.3□□□□□ -1.72
PPP4R1-229ENST00000584754 HDAC9Q9UKV0 1011 aa4.3□□□□□ -1.72
PPP4R1-229ENST00000584754 RAD54BQ9Y620 910 aa4.3□□□□□ -1.72
PPP4R1-229ENST00000584754 TRAPPC8Q9Y2L5 1435 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 CAMSAP1Q5T5Y3 1602 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 KDM5CP41229 1560 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 DIP2CQ9Y2E4 1556 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 A0A0B4J269 797 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 HMGB1P1B2RPK0 211 aaPredicted RBP4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 MASP2O00187 686 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 NPHP1O15259 732 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 PLA2G6O60733 806 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 DNAJB5O75953 348 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 C1QL1O75973 258 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 IGLV2-14P01704 120 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 HSPA1LP34931 641 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 PPM1FP49593 454 aaPredicted RBP4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 COPAP53621 1224 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 CACNA2D1P54289 1103 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 UCP3P55916 312 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 TUBB3Q13509 450 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 ARHGEF7Q14155 803 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 INO80DQ53TQ3 878 aaPredicted RBP4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 C3orf38Q5JPI3 329 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 PLAC9Q5JTB6 97 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 VPS53Q5VIR6 699 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 SYCE2Q6PIF2 218 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 ANKRD42Q8N9B4 389 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 FAM46DQ8NEK8 389 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 SNX27Q96L92 541 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 ISCA1Q9BUE6 129 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 TTLL2Q9BWV7 592 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 STK31Q9BXU1 1019 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 STK33Q9BYT3 514 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 TPSD1Q9BZJ3 242 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 MS4A7Q9GZW8 240 aaPredicted RBP4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 TMEM8AQ9HCN3 771 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 DKK3Q9UBP4 350 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 CA14Q9ULX7 337 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 TNFRSF18Q9Y5U5 241 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 MYO5CQ9NQX4 1742 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 PLCH2O75038 1416 aa4.29□□□□□ -1.72
PPP4R1-229ENST00000584754 ABCA6Q8N139 1617 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 REREQ9P2R6 1566 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 HSD3B1P14060 373 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 ZNF37AP17032 561 aaPredicted RBP4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 TPH1P17752 444 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 ABCB4P21439 1286 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 ACVR2AP27037 513 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 PPIFP30405 207 aaKnown RBP4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 HSPA7P48741 367 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 PXNP49023 591 aaPredicted RBP4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 NDUFV1P49821 464 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 CPT1AP50416 773 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 SOX10P56693 466 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 MRPS21P82921 87 aaKnown RBP4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 SP2Q02086 613 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 KRT17Q04695 432 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 RBM20Q5T481 1227 aaKnown RBP4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 TSTD2Q5T7W7 516 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 ERAP2Q6P179 960 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 TLDC1Q6P9B6 456 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 UNC13DQ70J99 1090 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 PRIMA1Q86XR5 153 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 LIX1LQ8IVB5 337 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 VGLL2Q8N8G2 317 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 PAGR1Q9BTK6 254 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 CRB3Q9BUF7 120 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 ALG8Q9BVK2 526 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 AMBRA1Q9C0C7 1298 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 TTYH3Q9C0H2 523 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 MYLK2Q9H1R3 596 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 CHST8Q9H2A9 424 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 TMOD4Q9NZQ9 345 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 HESX1Q9UBX0 185 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 CAPN11Q9UMQ6 739 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 COX11Q9Y6N1 276 aa4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 SUPT6HQ7KZ85 1726 aaKnown RBP4.28□□□□□ -1.72
PPP4R1-229ENST00000584754 ADGRA2Q96PE1 1338 aa4.27□□□□□ -1.73
PPP4R1-229ENST00000584754 CDK13Q14004 1512 aaKnown RBP4.27□□□□□ -1.73
PPP4R1-229ENST00000584754 ZNF142P52746 1687 aaPredicted RBP4.27□□□□□ -1.73
PPP4R1-229ENST00000584754 ZNF518AQ6AHZ1 1483 aa4.27□□□□□ -1.73
PPP4R1-229ENST00000584754 A0A087WV62 115 aa4.27□□□□□ -1.73
PPP4R1-229ENST00000584754 LINC00473A8K010 186 aa4.27□□□□□ -1.73
PPP4R1-229ENST00000584754 PROM1O43490 865 aa4.27□□□□□ -1.73
PPP4R1-229ENST00000584754 GLP2RO95838 553 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms