RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 TBC1D14Q9P2M4 693 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 USP3Q9Y6I4 520 aa13.89□□□□□ -0.19
ERBB2-220ENST00000584684 CHURC1-FNTBB4DL54 471 aa13.88□□□□□ -0.19
ERBB2-220ENST00000584684 K7ESF4 209 aa13.88□□□□□ -0.19
ERBB2-220ENST00000584684 CYP26A1O43174 497 aa13.88□□□□□ -0.19
ERBB2-220ENST00000584684 TLR5O60602 858 aa13.88□□□□□ -0.19
ERBB2-220ENST00000584684 CYP17A1P05093 508 aa13.88□□□□□ -0.19
ERBB2-220ENST00000584684 EIF2DP41214 584 aaKnown RBP13.88□□□□□ -0.19
ERBB2-220ENST00000584684 PSEN1P49768 467 aa13.88□□□□□ -0.19
ERBB2-220ENST00000584684 KIF11P52732 1056 aa13.88□□□□□ -0.19
ERBB2-220ENST00000584684 CETN1Q12798 172 aa13.88□□□□□ -0.19
ERBB2-220ENST00000584684 GAB4Q2WGN9 574 aa13.88□□□□□ -0.19
ERBB2-220ENST00000584684 ZNF394Q53GI3 561 aa13.88□□□□□ -0.19
ERBB2-220ENST00000584684 TSSK4Q6SA08 328 aa13.88□□□□□ -0.19
ERBB2-220ENST00000584684 ANKRD52Q8NB46 1076 aa13.88□□□□□ -0.19
ERBB2-220ENST00000584684 CD101Q93033 1021 aa13.88□□□□□ -0.19
ERBB2-220ENST00000584684 HEXIM2Q96MH2 286 aaKnown RBP13.88□□□□□ -0.19
ERBB2-220ENST00000584684 LINC00597Q9H2U6 94 aa13.88□□□□□ -0.19
ERBB2-220ENST00000584684 CHORDC1Q9UHD1 332 aaPredicted RBP13.88□□□□□ -0.19
ERBB2-220ENST00000584684 DMXL1Q9Y485 3027 aa13.88□□□□□ -0.19
ERBB2-220ENST00000584684 ATG13O75143 517 aa13.87□□□□□ -0.19
ERBB2-220ENST00000584684 ADH1CP00326 375 aa13.87□□□□□ -0.19
ERBB2-220ENST00000584684 ACO1P21399 889 aaKnown RBP13.87□□□□□ -0.19
ERBB2-220ENST00000584684 PGFP49763 221 aa13.87□□□□□ -0.19
ERBB2-220ENST00000584684 RAB41Q5JT25 222 aa13.87□□□□□ -0.19
ERBB2-220ENST00000584684 ADGRG2Q8IZP9 1017 aa13.87□□□□□ -0.19
ERBB2-220ENST00000584684 TTC16Q8NEE8 873 aa13.87□□□□□ -0.19
ERBB2-220ENST00000584684 CCDC26Q8TAB7 109 aa13.87□□□□□ -0.19
ERBB2-220ENST00000584684 LMO3Q8TAP4 145 aa13.87□□□□□ -0.19
ERBB2-220ENST00000584684 NT5C1BQ96P26 610 aa13.87□□□□□ -0.19
ERBB2-220ENST00000584684 CDK5RAP1Q96SZ6 601 aaKnown RBP13.87□□□□□ -0.19
ERBB2-220ENST00000584684 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.87□□□□□ -0.19
ERBB2-220ENST00000584684 CLIC5Q9NZA1 410 aa13.87□□□□□ -0.19
ERBB2-220ENST00000584684 RWDD2AQ9UIY3 292 aa13.87□□□□□ -0.19
ERBB2-220ENST00000584684 KIAA1257Q9ULG3 409 aa13.87□□□□□ -0.19
ERBB2-220ENST00000584684 CEP250Q9BV73 2442 aa13.87□□□□□ -0.19
ERBB2-220ENST00000584684 CCDC163A0A0D9SF12 145 aa13.86□□□□□ -0.19
ERBB2-220ENST00000584684 FGFR1OPO95684 399 aaKnown RBP13.86□□□□□ -0.19
ERBB2-220ENST00000584684 EGFP01133 1207 aa13.86□□□□□ -0.19
ERBB2-220ENST00000584684 PAEPP09466 180 aa13.86□□□□□ -0.19
ERBB2-220ENST00000584684 OPRD1P41143 372 aa13.86□□□□□ -0.19
ERBB2-220ENST00000584684 GALK1P51570 392 aa13.86□□□□□ -0.19
ERBB2-220ENST00000584684 BCAT1P54687 386 aa13.86□□□□□ -0.19
ERBB2-220ENST00000584684 SLC8A3P57103 927 aa13.86□□□□□ -0.19
ERBB2-220ENST00000584684 GCNT1Q02742 428 aa13.86□□□□□ -0.19
ERBB2-220ENST00000584684 DHCR24Q15392 516 aa13.86□□□□□ -0.19
ERBB2-220ENST00000584684 SGO2Q562F6 1265 aa13.86□□□□□ -0.19
ERBB2-220ENST00000584684 NAIF1Q69YI7 327 aaPredicted RBP13.86□□□□□ -0.19
ERBB2-220ENST00000584684 TTC30AQ86WT1 665 aa13.86□□□□□ -0.19
ERBB2-220ENST00000584684 EZH1Q92800 747 aaPredicted RBP13.86□□□□□ -0.19
ERBB2-220ENST00000584684 NACA2Q9H009 215 aa13.86□□□□□ -0.19
ERBB2-220ENST00000584684 CLSTN2Q9H4D0 955 aa13.86□□□□□ -0.19
ERBB2-220ENST00000584684 FBRSL1Q9HCM7 1045 aaKnown RBP13.86□□□□□ -0.19
ERBB2-220ENST00000584684 OSER1Q9NX31 292 aa13.86□□□□□ -0.19
ERBB2-220ENST00000584684 CACNA1AO00555 2505 aa13.86□□□□□ -0.19
ERBB2-220ENST00000584684 A0A1W2PQH9 124 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 O00370 1275 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 XPO1O14980 1071 aaKnown RBP13.85□□□□□ -0.19
ERBB2-220ENST00000584684 HOXC11O43248 304 aaPredicted RBP13.85□□□□□ -0.19
ERBB2-220ENST00000584684 GREM1O60565 184 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 RNF40O75150 1001 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 AFPP02771 609 aaKnown RBP13.85□□□□□ -0.19
ERBB2-220ENST00000584684 SETSIPP0DME0 302 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 CCDC192P0DO97 292 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 CNR2P34972 360 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 ATP5C1P36542 298 aaKnown RBP13.85□□□□□ -0.19
ERBB2-220ENST00000584684 STX17P56962 302 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 GOLGA8FQ08AF8 430 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 GOLGA8DPQ0D2H9 430 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 BST2Q10589 180 aaKnown RBP13.85□□□□□ -0.19
ERBB2-220ENST00000584684 KCNH2Q12809 1159 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 CAMK4Q16566 473 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 GOLGA7BQ2TAP0 167 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 SMYD5Q6GMV2 418 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 PKN3Q6P5Z2 889 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 RHBDF2Q6PJF5 856 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 HTR3DQ70Z44 454 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 SCD5Q86SK9 330 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 TADA2BQ86TJ2 420 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 PIGZQ86VD9 579 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 LONP2Q86WA8 852 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 ARHGAP18Q8N392 663 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 MLKLQ8NB16 471 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 RUBCNQ92622 972 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 JAKMIP2Q96AA8 810 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 ACDQ96AP0 544 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 KLF16Q9BXK1 252 aaPredicted RBP13.85□□□□□ -0.19
ERBB2-220ENST00000584684 SRRTQ9BXP5 876 aaKnown RBP13.85□□□□□ -0.19
ERBB2-220ENST00000584684 NMUR1Q9HB89 426 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 C2orf42Q9NWW7 574 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 TSPAN16Q9UKR8 245 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 SMG5Q9UPR3 1016 aaKnown RBP13.85□□□□□ -0.19
ERBB2-220ENST00000584684 SH3BP1Q9Y3L3 701 aa13.85□□□□□ -0.19
ERBB2-220ENST00000584684 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.85□□□□□ -0.19
ERBB2-220ENST00000584684 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.84□□□□□ -0.19
ERBB2-220ENST00000584684 VDRP11473 427 aa13.84□□□□□ -0.19
ERBB2-220ENST00000584684 ADH5P11766 374 aa13.84□□□□□ -0.19
ERBB2-220ENST00000584684 PLA2G4AP47712 749 aa13.84□□□□□ -0.19
ERBB2-220ENST00000584684 ZNF132P52740 706 aa13.84□□□□□ -0.19
ERBB2-220ENST00000584684 LRMPQ12912 555 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms