RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 KCTD17Q8N5Z5 321 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 ATL2Q8NHH9 583 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 SPOCK2Q92563 424 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 PCED1BQ96HM7 432 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 CYP2S1Q96SQ9 504 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 ELAC2Q9BQ52 826 aaKnown RBP10.73□□□□□ -0.69
RFFL-212ENST00000584655 SYT15Q9BQS2 421 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 GDF3Q9NR23 364 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 FAM114A2Q9NRY5 505 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 MPP6Q9NZW5 540 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 PTCH2Q9Y6C5 1203 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 ATAD5Q96QE3 1844 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 TOP3BO95985 862 aaKnown RBP10.73□□□□□ -0.69
RFFL-212ENST00000584655 PRLRP16471 622 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 MNAT1P51948 309 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 DCLK2Q8N568 766 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 DNAAF3Q8N9W5 541 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 PYROXD1Q8WU10 500 aa10.73□□□□□ -0.69
RFFL-212ENST00000584655 ARHGEF2Q92974 986 aaKnown RBP10.73□□□□□ -0.69
RFFL-212ENST00000584655 XPO7Q9UIA9 1087 aaKnown RBP10.73□□□□□ -0.69
RFFL-212ENST00000584655 KITP10721 976 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 PTPN1P18031 435 aaKnown RBP10.72□□□□□ -0.69
RFFL-212ENST00000584655 PGFP49763 221 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 TFDP3Q5H9I0 405 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 CYP4X1Q8N118 509 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 RSAD1Q9HA92 442 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 STYXL1Q9Y6J8 313 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 IKBKGQ9Y6K9 419 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 BRWD1Q9NSI6 2320 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 A0A0A6YYK5 440 aaPredicted RBP10.72□□□□□ -0.69
RFFL-212ENST00000584655 VDRP11473 427 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 EPHB2P29323 1055 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 IRAK1P51617 712 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 DEUP1Q05D60 604 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 FAM133BQ5BKY9 247 aaKnown RBP10.72□□□□□ -0.69
RFFL-212ENST00000584655 AGMOQ6ZNB7 445 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 PID1Q7Z2X4 250 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 RNF180Q86T96 592 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 FMNL3Q8IVF7 1028 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 ZNF296Q8WUU4 475 aaPredicted RBP10.72□□□□□ -0.69
RFFL-212ENST00000584655 SNX27Q96L92 541 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 ASB7Q9H672 318 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 ASNSD1Q9NWL6 643 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 MARCOQ9UEW3 520 aaPredicted RBP10.72□□□□□ -0.69
RFFL-212ENST00000584655 CCL22O00626 93 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 MAN1A1P33908 653 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 VEGFBP49765 207 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 OVGP1Q12889 678 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 MORN1Q5T089 497 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 ZDHHC24Q6UX98 284 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 OTOP2Q7RTS6 562 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 INTUQ9ULD6 942 aa10.72□□□□□ -0.69
RFFL-212ENST00000584655 RASA4BC9J798 803 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 RASA4O43374 803 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 GAS2O43903 313 aaKnown RBP10.71□□□□□ -0.69
RFFL-212ENST00000584655 B4GALT3O60512 393 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 CHN1P15882 459 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 KDELR1P24390 212 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 GRM5P41594 1212 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 KIAA0319Q5VV43 1072 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 PLEKHA7Q6IQ23 1121 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 PRSS55Q6UWB4 352 aaPredicted RBP10.71□□□□□ -0.69
RFFL-212ENST00000584655 C3orf62Q6ZUJ4 267 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 C3orf20Q8ND61 904 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 PDCD6IPQ8WUM4 868 aaKnown RBP10.71□□□□□ -0.69
RFFL-212ENST00000584655 PIK3R5Q8WYR1 880 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 SHCBP1LQ9BZQ2 653 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 UNC93B1Q9H1C4 597 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 SLITRK6Q9H5Y7 841 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 AP4E1Q9UPM8 1137 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 TRIP11Q15643 1979 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 PIRTP0C851 137 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 FAM200BP0CF97 657 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 ECHS1P30084 290 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 C1QBPQ07021 282 aaKnown RBP10.71□□□□□ -0.69
RFFL-212ENST00000584655 CCDC14Q49A88 953 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 EXOC8Q8IYI6 725 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 TRIM11Q96F44 468 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 SNF8Q96H20 258 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 ATP6V1G3Q96LB4 118 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 CERS4Q9HA82 394 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 INTS9Q9NV88 658 aaKnown RBP10.71□□□□□ -0.69
RFFL-212ENST00000584655 TMLHEQ9NVH6 421 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 GRHL1Q9NZI5 618 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 DCTN4Q9UJW0 460 aa10.71□□□□□ -0.69
RFFL-212ENST00000584655 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.71□□□□□ -0.7
RFFL-212ENST00000584655 FAM72CH0Y354 149 aa10.71□□□□□ -0.7
RFFL-212ENST00000584655 SLC10A3P09131 477 aa10.71□□□□□ -0.7
RFFL-212ENST00000584655 BRAFP15056 766 aa10.71□□□□□ -0.7
RFFL-212ENST00000584655 ACLYP53396 1101 aa10.71□□□□□ -0.7
RFFL-212ENST00000584655 FAM72AQ5TYM5 149 aa10.71□□□□□ -0.7
RFFL-212ENST00000584655 FAM72DQ6L9T8 149 aa10.71□□□□□ -0.7
RFFL-212ENST00000584655 LRRC31Q6UY01 552 aa10.71□□□□□ -0.7
RFFL-212ENST00000584655 FAM72BQ86X60 149 aa10.71□□□□□ -0.7
RFFL-212ENST00000584655 FUKQ8N0W3 1084 aa10.71□□□□□ -0.7
RFFL-212ENST00000584655 HNRNPLLQ8WVV9 542 aaKnown RBP10.71□□□□□ -0.7
RFFL-212ENST00000584655 MOCOSQ96EN8 888 aa10.71□□□□□ -0.7
RFFL-212ENST00000584655 SPON2Q9BUD6 331 aa10.71□□□□□ -0.7
RFFL-212ENST00000584655 FEZ2Q9UHY8 353 aaPredicted RBP10.71□□□□□ -0.7
RFFL-212ENST00000584655 A0A0U1RQS6 177 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms