RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 KRT37O76014 449 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 TFE3P19532 575 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-217ENST00000584582 GEMIN4P57678 1058 aaKnown RBP11.75□□□□□ -0.53
TOP3A-217ENST00000584582 CCDC62Q6P9F0 684 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 KCNT2Q6UVM3 1135 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 ALLCQ8N6M5 410 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 PDCD7Q8N8D1 485 aaKnown RBP11.75□□□□□ -0.53
TOP3A-217ENST00000584582 TCP10LQ8TDR4 215 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 PCDH9Q9HC56 1237 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 HAO1Q9UJM8 370 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 ADAMTS5Q9UNA0 930 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 MYO9BQ13459 2157 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 CILPO75339 1184 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 AP1G2O75843 785 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 ATG7O95352 703 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 TPH1P17752 444 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 NDUFV1P49821 464 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 FAAP100Q0VG06 881 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 DPYSL3Q14195 570 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 ZCCHC23Q6ZST2 131 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 NDUFAF2Q8N183 169 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 TNIP3Q96KP6 325 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 OSBPL7Q9BZF2 842 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 XYLT2Q9H1B5 865 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 KRT82Q9NSB4 513 aa11.75□□□□□ -0.53
TOP3A-217ENST00000584582 LY75O60449 1722 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 C2orf71A6NGG8 1288 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 ARHGAP42A6NI28 874 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 DNM1LO00429 736 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 ZNF268Q14587 947 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-217ENST00000584582 MFSD10Q14728 455 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 MORF4L2Q15014 288 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 SIX1Q15475 284 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-217ENST00000584582 C15orf39Q6ZRI6 1047 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 ZCCHC9Q8N567 271 aaKnown RBP11.74□□□□□ -0.53
TOP3A-217ENST00000584582 KAT2BQ92831 832 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 ACSS2Q9NR19 701 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 UBQLN1Q9UMX0 589 aaKnown RBP11.74□□□□□ -0.53
TOP3A-217ENST00000584582 NENFQ9UMX5 172 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.74□□□□□ -0.53
TOP3A-217ENST00000584582 ARL2BPQ9Y2Y0 163 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 COMMD10Q9Y6G5 202 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 DCAF8L1A6NGE4 600 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 TRUB2O95900 331 aaKnown RBP11.74□□□□□ -0.53
TOP3A-217ENST00000584582 GOT1P17174 413 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 EPHB2P29323 1055 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 GJA5P36382 358 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 HADHBP55084 474 aaKnown RBP11.74□□□□□ -0.53
TOP3A-217ENST00000584582 ZNF252P-AS1Q0IIN9 211 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 KLHL38Q2WGJ6 581 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 BOLA3Q53S33 107 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 EFHC2Q5JST6 749 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 NOL9Q5SY16 702 aaKnown RBP11.74□□□□□ -0.53
TOP3A-217ENST00000584582 NXNQ6DKJ4 435 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 RSPH3Q86UC2 560 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 PIGZQ86VD9 579 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 STKLD1Q8NE28 680 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 PRCCQ92733 491 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-217ENST00000584582 ATXN3LQ9H3M9 355 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 ACTR5Q9H9F9 607 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-217ENST00000584582 AAASQ9NRG9 546 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 DDX43Q9NXZ2 648 aaKnown RBP11.74□□□□□ -0.53
TOP3A-217ENST00000584582 L3MBTL1Q9Y468 752 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 DLEC1Q9Y238 1755 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 GOLGA8CPA6NN73 597 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 MTA2O94776 668 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 COL11A2P13942 1736 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-217ENST00000584582 MMP13P45452 471 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 TKTL1P51854 596 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 USP50Q70EL3 339 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-217ENST00000584582 ZNF560Q96MR9 790 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 ZMAT2Q96NC0 199 aaKnown RBP11.74□□□□□ -0.53
TOP3A-217ENST00000584582 VTA1Q9NP79 307 aa11.74□□□□□ -0.53
TOP3A-217ENST00000584582 CBX6O95503 412 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 BAG2O95816 211 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 USP17L7P0C7H9 530 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 BGNP21810 368 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 KDSRQ06136 332 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 GEN1Q17RS7 908 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 ANKRD20A8PQ5CZ79 823 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 LRRC6Q86X45 466 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 RNF135Q8IUD6 432 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 PARP9Q8IXQ6 854 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 EIF1ADQ8N9N8 165 aaKnown RBP11.73□□□□□ -0.53
TOP3A-217ENST00000584582 NPLOC4Q8TAT6 608 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 PGLYRP2Q96PD5 576 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 FAM193BQ96PV7 902 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-217ENST00000584582 PPP1R12CQ9BZL4 782 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.73□□□□□ -0.53
TOP3A-217ENST00000584582 ITGA11Q9UKX5 1188 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 STAP1Q9ULZ2 295 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 MYH9P35579 1960 aaKnown RBP11.73□□□□□ -0.53
TOP3A-217ENST00000584582 C17orf102A2RUQ5 167 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 MMP3P08254 477 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 NCF2P19878 526 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-217ENST00000584582 SCNN1GP51170 649 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 TPI1P60174 286 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 MPP2Q14168 576 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 TAF12Q16514 161 aa11.73□□□□□ -0.53
TOP3A-217ENST00000584582 PCSK7Q16549 785 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms