RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 TNMDQ9H2S6 317 aa10.88□□□□□ -0.67
GGA3-219ENST00000584550 ABCB6Q9NP58 842 aa10.88□□□□□ -0.67
GGA3-219ENST00000584550 CHMP5Q9NZZ3 219 aa10.88□□□□□ -0.67
GGA3-219ENST00000584550 CFAP97Q9P2B7 532 aa10.88□□□□□ -0.67
GGA3-219ENST00000584550 L1RE1Q9UN81 338 aa10.88□□□□□ -0.67
GGA3-219ENST00000584550 C2CD2Q9Y426 696 aa10.88□□□□□ -0.67
GGA3-219ENST00000584550 MAST4O15021 2626 aa10.88□□□□□ -0.67
GGA3-219ENST00000584550 TRIM24O15164 1050 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 ZBTB24O43167 697 aaPredicted RBP10.87□□□□□ -0.67
GGA3-219ENST00000584550 ACTN4O43707 911 aaKnown RBP10.87□□□□□ -0.67
GGA3-219ENST00000584550 HUS1O60921 280 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 ATP2C2O75185 946 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 ADH1CP00326 375 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 SLFN14P0C7P3 912 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 GNSP15586 552 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 NDUFV2P19404 249 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 ITPKBP27987 946 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 POLR2BP30876 1174 aaKnown RBP10.87□□□□□ -0.67
GGA3-219ENST00000584550 GRIK1P39086 918 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 PDE6CP51160 858 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 MYL7Q01449 175 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 LY6G5CQ5SRR4 150 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 C10orf76Q5T2E6 689 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 SYCP2LQ5T4T6 812 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 GLRX5Q86SX6 157 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 RHBDD1Q8TEB9 315 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 ZNF419Q96HQ0 510 aaPredicted RBP10.87□□□□□ -0.67
GGA3-219ENST00000584550 FAM84AQ96KN4 292 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 ACOX2Q99424 681 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 PKMYT1Q99640 499 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 C7orf25Q9BPX7 421 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 FGFBP2Q9BYJ0 223 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 MIR1-1HGQ9H1L0 117 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 IKZF4Q9H2S9 585 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 GOLPH3LQ9H4A5 285 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 FAM124BQ9H5Z6 455 aaPredicted RBP10.87□□□□□ -0.67
GGA3-219ENST00000584550 ASB7Q9H672 318 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 TOR4AQ9NXH8 423 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 TRPM5Q9NZQ8 1165 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 KIAA1522Q9P206 1035 aaPredicted RBP10.87□□□□□ -0.67
GGA3-219ENST00000584550 SEL1LQ9UBV2 794 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 HCN2Q9UL51 889 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 AGAP1Q9UPQ3 857 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 RAD54BQ9Y620 910 aa10.87□□□□□ -0.67
GGA3-219ENST00000584550 A0A087WV48 116 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 A0A1W2PQ27 194 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 A0A1W2PQ64 194 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 A0A1W2PQF6 199 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.86□□□□□ -0.67
GGA3-219ENST00000584550 SLC9A3R1O14745 358 aaPredicted RBP10.86□□□□□ -0.67
GGA3-219ENST00000584550 ZNF217O75362 1048 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 PIGRP01833 764 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 ITGB3P05106 788 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 MBL2P11226 248 aaPredicted RBP10.86□□□□□ -0.67
GGA3-219ENST00000584550 BDNFP23560 247 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 NTSR1P30989 418 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 EIF2DP41214 584 aaKnown RBP10.86□□□□□ -0.67
GGA3-219ENST00000584550 ABCG1P45844 678 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 CASP5P51878 434 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 PSMC1P62191 440 aaKnown RBP10.86□□□□□ -0.67
GGA3-219ENST00000584550 TFAMQ00059 246 aaKnown RBP10.86□□□□□ -0.67
GGA3-219ENST00000584550 GTF2BQ00403 316 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 KCNA1Q09470 495 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 IFRD2Q12894 506 aaPredicted RBP10.86□□□□□ -0.67
GGA3-219ENST00000584550 CUL4BQ13620 913 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 ANO4Q32M45 955 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 CFAP221Q4G0U5 840 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 SYCP3Q8IZU3 236 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 PHTF2Q8N3S3 785 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 ZCCHC9Q8N567 271 aaKnown RBP10.86□□□□□ -0.67
GGA3-219ENST00000584550 PAGE5Q96GU1 130 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 ZNF560Q96MR9 790 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 GAREM1Q9H706 876 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 MAGEF1Q9HAY2 307 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 MAGEC2Q9UBF1 373 aaPredicted RBP10.86□□□□□ -0.67
GGA3-219ENST00000584550 DKK4Q9UBT3 224 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 AGO2Q9UKV8 859 aaKnown RBP10.86□□□□□ -0.67
GGA3-219ENST00000584550 HPSEQ9Y251 543 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 SNX9Q9Y5X1 595 aa10.86□□□□□ -0.67
GGA3-219ENST00000584550 FRMD3A2A2Y4 597 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 ZNF840PA6NDX5 716 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 MEI4A8MW99 385 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 TULP3O75386 442 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 PRPF6O94906 941 aaKnown RBP10.85□□□□□ -0.67
GGA3-219ENST00000584550 KRT19P08727 400 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 SCP2P22307 547 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 LMO2P25791 158 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 ABCD1P33897 745 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 WNT7BP56706 349 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 SLC7A9P82251 487 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 CYP27A1Q02318 531 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 GAD2Q05329 585 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 WDR45BQ5MNZ6 344 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 BTBD8Q5XKL5 378 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 EGFLAMQ63HQ2 1017 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 SDE2Q6IQ49 451 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 KIAA1324Q6UXG2 1013 aaKnown RBP10.85□□□□□ -0.67
GGA3-219ENST00000584550 CRELD2Q6UXH1 353 aaPredicted RBP10.85□□□□□ -0.67
GGA3-219ENST00000584550 DENND5BQ6ZUT9 1274 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 TRMT11Q7Z4G4 463 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms