RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 GUCD1Q96NT3 240 aa19.22■□□□□ 0.67
RFFL-211ENST00000584541 PACSIN1Q9BY11 444 aa19.22■□□□□ 0.67
RFFL-211ENST00000584541 AVENQ9NQS1 362 aaPredicted RBP19.22■□□□□ 0.67
RFFL-211ENST00000584541 ASNSD1Q9NWL6 643 aa19.22■□□□□ 0.67
RFFL-211ENST00000584541 TRPM5Q9NZQ8 1165 aa19.22■□□□□ 0.67
RFFL-211ENST00000584541 ADGRG1Q9Y653 693 aa19.22■□□□□ 0.67
RFFL-211ENST00000584541 NCANO14594 1321 aa19.22■□□□□ 0.67
RFFL-211ENST00000584541 GLI1P08151 1106 aa19.21■□□□□ 0.67
RFFL-211ENST00000584541 CDC25CP30307 473 aa19.21■□□□□ 0.67
RFFL-211ENST00000584541 CTC1Q2NKJ3 1217 aa19.21■□□□□ 0.67
RFFL-211ENST00000584541 HS1BP3Q53T59 392 aa19.21■□□□□ 0.67
RFFL-211ENST00000584541 TMC5Q6UXY8 1006 aa19.21■□□□□ 0.67
RFFL-211ENST00000584541 PDZD4Q76G19 769 aaPredicted RBP19.21■□□□□ 0.67
RFFL-211ENST00000584541 PHLDB2Q86SQ0 1253 aa19.21■□□□□ 0.67
RFFL-211ENST00000584541 MTMR10Q9NXD2 777 aa19.21■□□□□ 0.67
RFFL-211ENST00000584541 GMIPQ9P107 970 aa19.21■□□□□ 0.67
RFFL-211ENST00000584541 REXO2Q9Y3B8 237 aaKnown RBP19.21■□□□□ 0.67
RFFL-211ENST00000584541 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.21■□□□□ 0.672e-8■■■■■ 28.1
RFFL-211ENST00000584541 ANAPC1Q9H1A4 1944 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 YJEFN3A6XGL0 299 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 E7ENQ6 273 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 ATMINO43313 823 aaPredicted RBP19.2■□□□□ 0.66
RFFL-211ENST00000584541 HSF2BPO75031 334 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 PAPLNO95428 1278 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 ABL1P00519 1130 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 LTFP02788 710 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 CYP1A2P05177 515 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 KRT3P12035 628 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 MYL4P12829 197 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 YWHAGP61981 247 aaKnown RBP eCLIP19.2■□□□□ 0.66
RFFL-211ENST00000584541 YWHAZP63104 245 aaKnown RBP19.2■□□□□ 0.66
RFFL-211ENST00000584541 ITIH3Q06033 890 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 KIF5AQ12840 1032 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 BTBD8Q5XKL5 378 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 PLEKHA7Q6IQ23 1121 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 CES5AQ6NT32 575 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 DCUN1D2Q6PH85 259 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 SLC26A9Q7LBE3 791 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 RHOT2Q8IXI1 618 aa19.2■□□□□ 0.66
RFFL-211ENST00000584541 NDRG1Q92597 394 aaKnown RBP19.2■□□□□ 0.66
RFFL-211ENST00000584541 ZNF707Q96C28 371 aaPredicted RBP19.2■□□□□ 0.66
RFFL-211ENST00000584541 ZNF334Q9HCZ1 680 aaPredicted RBP19.2■□□□□ 0.66
RFFL-211ENST00000584541 METTL5Q9NRN9 209 aaKnown RBP19.2■□□□□ 0.66
RFFL-211ENST00000584541 DNMT3BQ9UBC3 853 aaKnown RBP19.2■□□□□ 0.66
RFFL-211ENST00000584541 CHORDC1Q9UHD1 332 aaPredicted RBP19.2■□□□□ 0.66
RFFL-211ENST00000584541 SIGLEC16A6NMB1 481 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 ZNF197O14709 1029 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 CAPN9O14815 690 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 ZSCAN12O43309 604 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 TBX10O75333 385 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 RHOP08100 348 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 RALAP11233 206 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 DESP17661 470 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 GABRR2P28476 465 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 RNASE9P60153 205 aaKnown RBP19.19■□□□□ 0.66
RFFL-211ENST00000584541 COL19A1Q14993 1142 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 SKIV2LQ15477 1246 aaKnown RBP19.19■□□□□ 0.66
RFFL-211ENST00000584541 CCDC85BQ15834 202 aaPredicted RBP19.19■□□□□ 0.66
RFFL-211ENST00000584541 BSPRYQ5W0U4 402 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 SYCE2Q6PIF2 218 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 GRASPQ7Z6J2 395 aaPredicted RBP19.19■□□□□ 0.66
RFFL-211ENST00000584541 GPR149Q86SP6 731 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 TMC8Q8IU68 726 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 HS6ST3Q8IZP7 471 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 ARHGEF26Q96DR7 871 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 NUP85Q9BW27 656 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 TSGA10Q9BZW7 698 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 POPDC2Q9HBU9 364 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 ABCC13Q9NSE7 274 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 HCFC1R1Q9NWW0 138 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 CLEC1BQ9P126 229 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 CTTNBP2NLQ9P2B4 639 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 UVRAGQ9P2Y5 699 aa19.19■□□□□ 0.66
RFFL-211ENST00000584541 A0A1W2PQH9 124 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 PJA2O43164 708 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 GRAP2O75791 330 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 F11P03951 625 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 EPHA5P54756 1037 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 MAMLD1Q13495 774 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 ARCQ7LC44 396 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 BHLHA9Q7RTU4 235 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 TADA2BQ86TJ2 420 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 FEZF2Q8TBJ5 459 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 RNF139Q8WU17 664 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 RFFLQ8WZ73 363 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 MRPS31Q92665 395 aaKnown RBP19.18■□□□□ 0.66
RFFL-211ENST00000584541 PIWIL1Q96J94 861 aaKnown RBP19.18■□□□□ 0.66
RFFL-211ENST00000584541 MCEEQ96PE7 176 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 CDK5RAP1Q96SZ6 601 aaKnown RBP19.18■□□□□ 0.66
RFFL-211ENST00000584541 APOL5Q9BWW9 433 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 LRRC3Q9BY71 257 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 ADAM7Q9H2U9 754 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 ATXN3LQ9H3M9 355 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 CLIC5Q9NZA1 410 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 PPP2R2CQ9Y2T4 447 aa19.18■□□□□ 0.66
RFFL-211ENST00000584541 DOCK6Q96HP0 2047 aa19.17■□□□□ 0.66
RFFL-211ENST00000584541 A0A0A6YYK5 440 aaPredicted RBP19.17■□□□□ 0.66
RFFL-211ENST00000584541 TCRBV5S1A1TA0A578 114 aa19.17■□□□□ 0.66
RFFL-211ENST00000584541 CCP110O43303 1012 aa19.17■□□□□ 0.66
RFFL-211ENST00000584541 KRT86O43790 486 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms