RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 STX7O15400 261 aaKnown RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 CLOCKO15516 846 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 SERPIND1P05546 499 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 VDRP11473 427 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 ST13P50502 369 aaKnown RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 FAM98BQ52LJ0 330 aaKnown RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 AGKQ53H12 422 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 KHDRBS2Q5VWX1 349 aaKnown RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 OTOAQ7RTW8 1153 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 CD302Q8IX05 232 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 TRIM8Q9BZR9 551 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 VTA1Q9NP79 307 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 KRCC1Q9NPI7 259 aaPredicted RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 INO80Q9ULG1 1556 aaPredicted RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 SLC2A3P11169 496 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 GARTP22102 1010 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 TNFRSF8P28908 595 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 TOB1P50616 345 aaPredicted RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 RPL10AP62906 217 aaKnown RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 CNTN1Q12860 1018 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 ADCK2Q7Z695 626 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 CLVS1Q8IUQ0 354 aaPredicted RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 KCTD14Q9BQ13 255 aaPredicted RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 GINS4Q9BRT9 223 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 RUSC1Q9BVN2 902 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 RAD21L1Q9H4I0 556 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 UBAP1Q9NZ09 502 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 PRG3Q9Y2Y8 225 aaPredicted RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 RPS6KA5O75582 802 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 SERPINH1P50454 418 aaKnown RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 CDK16Q00536 496 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 MPP3Q13368 585 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 FAM45BPQ6NSW5 357 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 DCP1BQ8IZD4 617 aaKnown RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 TTC30BQ8N4P2 665 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 USP13Q92995 863 aaPredicted RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 TMEM121Q9BTD3 319 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 TARS2Q9BW92 718 aaKnown RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 DCLK3Q9C098 648 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 MYLK2Q9H1R3 596 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 FANCEQ9HB96 536 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 ASMTLO95671 621 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 NCAM1P13591 858 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 RAG1P15918 1043 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 ME2P23368 584 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 SLC1A6P48664 564 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 TWF1Q12792 350 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 B3GNT6Q6ZMB0 384 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 DHFR2Q86XF0 187 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 SETD9Q8NE22 299 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 ST13P5Q8NFI4 369 aaPredicted RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 OR6Y1Q8NGX8 325 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 DLG3Q92796 817 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 MUC3BQ9H195 1237 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 SYTL2Q9HCH5 934 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 CROTQ9UKG9 612 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 CDC42BPBQ9Y5S2 1711 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 SLC37A4O43826 429 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 PMPCBO75439 489 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 F9P00740 461 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 RRM1P23921 792 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 DGUOKQ16854 277 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 NT5DC1Q5TFE4 455 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 TIGD7Q6NT04 549 aaPredicted RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 HHIPL2Q6UWX4 724 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 OMA1Q96E52 524 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 TLR10Q9BXR5 811 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 CHST12Q9NRB3 414 aa13.45□□□□□ -0.26
RNF43-208ENST00000584437 IARS2Q9NSE4 1012 aaKnown RBP13.45□□□□□ -0.26
RNF43-208ENST00000584437 MAGEB16A2A368 324 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 C2orf81A6NN90 581 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 AVPR1AP37288 418 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 RFX5P48382 616 aaPredicted RBP13.44□□□□□ -0.26
RNF43-208ENST00000584437 CCT8P50990 548 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 NCKAP1LP55160 1127 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 ITGA9Q13797 1035 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 CYP4Z1Q86W10 505 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 TCP10LQ8TDR4 215 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 KCNH7Q9NS40 1196 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 PRDM4Q9UKN5 801 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 TMEM191CA6NGB0 347 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 MSH4O15457 936 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 PSMB9P28065 219 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 PPP1R10Q96QC0 940 aaKnown RBP13.44□□□□□ -0.26
RNF43-208ENST00000584437 C9orf16Q9BUW7 83 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 RNPEPQ9H4A4 650 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 QTRT2Q9H974 415 aaKnown RBP13.44□□□□□ -0.26
RNF43-208ENST00000584437 HMG20AQ9NP66 347 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 DDX18Q9NVP1 670 aaKnown RBP13.44□□□□□ -0.26
RNF43-208ENST00000584437 AHCYL1O43865 530 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 SMNDC1O75940 238 aaKnown RBP eCLIP13.44□□□□□ -0.265e-6■□□□□ 10.8
RNF43-208ENST00000584437 PSMG1O95456 288 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 ALDH1A1P00352 501 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 LDLRP01130 860 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 IL5RAQ01344 420 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 TRAF2Q12933 501 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 SLC45A4Q5BKX6 768 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 FGD2Q7Z6J4 655 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 NSMCE2Q96MF7 247 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms