RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 A0A1W2PQF6 199 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 EIF4E1BA6NMX2 242 aaKnown RBP14.18□□□□□ -0.14
COPS3-218ENST00000584216 PTPN1P18031 435 aaKnown RBP14.18□□□□□ -0.14
COPS3-218ENST00000584216 NDUFV2P19404 249 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 CASP5P51878 434 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 GOLGA8FQ08AF8 430 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 GOLGA8DPQ0D2H9 430 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 RABEP1Q15276 862 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 SNX30Q5VWJ9 437 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 CCNI2Q6ZMN8 369 aaPredicted RBP14.18□□□□□ -0.14
COPS3-218ENST00000584216 CCDC73Q6ZRK6 1079 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 SLC41A1Q8IVJ1 513 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 OR5B17Q8NGF7 314 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 IPO4Q8TEX9 1081 aaKnown RBP14.18□□□□□ -0.14
COPS3-218ENST00000584216 DNAJC19Q96DA6 116 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 ZNF419Q96HQ0 510 aaPredicted RBP14.18□□□□□ -0.14
COPS3-218ENST00000584216 EPSTI1Q96J88 318 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 FAM84AQ96KN4 292 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 KIF2CQ99661 725 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 DNAJC17Q9NVM6 304 aaKnown RBP14.18□□□□□ -0.14
COPS3-218ENST00000584216 COMMD8Q9NX08 183 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 SMC3Q9UQE7 1217 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 NFE2L3Q9Y4A8 694 aa14.18□□□□□ -0.14
COPS3-218ENST00000584216 FRMD3A2A2Y4 597 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 A8MXQ7 604 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 GFRA2O00451 464 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 GJB3O75712 270 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 LARP1BQ659C4 914 aaKnown RBP14.17□□□□□ -0.14
COPS3-218ENST00000584216 SCARA3Q6AZY7 606 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 C19orf48Q6RUI8 117 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 TRAPPC11Q7Z392 1133 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 GLRX5Q86SX6 157 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 BBS7Q8IWZ6 715 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 CCDC65Q8IXS2 484 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 SPRYD3Q8NCJ5 442 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 B3GALNT2Q8NCR0 500 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 OR2I1PQ8NGU4 316 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 ZFRQ96KR1 1074 aaKnown RBP14.17□□□□□ -0.14
COPS3-218ENST00000584216 GABRG3Q99928 467 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 MRPL45Q9BRJ2 306 aaKnown RBP14.17□□□□□ -0.14
COPS3-218ENST00000584216 ZNF518BQ9C0D4 1074 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.17□□□□□ -0.14
COPS3-218ENST00000584216 PANK4Q9NVE7 773 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 WDR35Q9P2L0 1181 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.17□□□□□ -0.14
COPS3-218ENST00000584216 TNRC6BQ9UPQ9 1833 aaKnown RBP14.17□□□□□ -0.14
COPS3-218ENST00000584216 PLXND1Q9Y4D7 1925 aa14.17□□□□□ -0.14
COPS3-218ENST00000584216 ASCC3Q8N3C0 2202 aaKnown RBP14.17□□□□□ -0.14
COPS3-218ENST00000584216 PTPRJQ12913 1337 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 AKAP13Q12802 2813 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 ANAPC1Q9H1A4 1944 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 CACNG3O60359 315 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 TNNI1P19237 187 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 WASP42768 502 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 TRPC3Q13507 836 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 E2F5Q15329 346 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 COL28A1Q2UY09 1125 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 WDR72Q3MJ13 1102 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 EGFLAMQ63HQ2 1017 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 IL27RAQ6UWB1 636 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 TMEM25Q86YD3 366 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 CBWD2Q8IUF1 395 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 TMX3Q96JJ7 454 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 CAMK1GQ96NX5 476 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 DMAP1Q9NPF5 467 aaPredicted RBP14.16□□□□□ -0.14
COPS3-218ENST00000584216 SCUBE2Q9NQ36 999 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 HSPBP1Q9NZL4 362 aa14.16□□□□□ -0.14
COPS3-218ENST00000584216 KIAA1522Q9P206 1035 aaPredicted RBP14.16□□□□□ -0.14
COPS3-218ENST00000584216 LSM7Q9UK45 103 aaKnown RBP14.16□□□□□ -0.14
COPS3-218ENST00000584216 DMXL2Q8TDJ6 3036 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 ANKRD11Q6UB99 2663 aaPredicted RBP14.15□□□□□ -0.14
COPS3-218ENST00000584216 A0A1B0GTW7 788 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 MEI4A8MW99 385 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 NEDD8-MDP1E9PL57 170 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 STAU1O95793 577 aaKnown RBP14.15□□□□□ -0.14
COPS3-218ENST00000584216 CER1O95813 267 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 DLATP10515 647 aaKnown RBP14.15□□□□□ -0.14
COPS3-218ENST00000584216 CD6P30203 668 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 ATICP31939 592 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 STAT6P42226 847 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 ZNF132P52740 706 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 SLC5A3P53794 718 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 CACNA2D1P54289 1103 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 GRIK2Q13002 908 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 STARD3Q14849 445 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 SOWAHCQ53LP3 525 aaPredicted RBP14.15□□□□□ -0.14
COPS3-218ENST00000584216 KIAA1324Q6UXG2 1013 aaKnown RBP14.15□□□□□ -0.14
COPS3-218ENST00000584216 TOGARAM2Q6ZUX3 1019 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 HTR3DQ70Z44 454 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 SMARCD1Q96GM5 515 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 TNIP3Q96KP6 325 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 MRGPRX1Q96LB2 322 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 BBS2Q9BXC9 721 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 B3GNT5Q9BYG0 378 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 LRRC27Q9C0I9 530 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 CCSER2Q9H7U1 834 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 PPP4R2Q9NY27 417 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 CHORDC1Q9UHD1 332 aaPredicted RBP14.15□□□□□ -0.14
COPS3-218ENST00000584216 SRPRBQ9Y5M8 271 aaKnown RBP14.15□□□□□ -0.14
COPS3-218ENST00000584216 FASNP49327 2511 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms