RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 SCUBE3Q8IX30 993 aa12.24□□□□□ -0.45
NUP85-224ENST00000583948 CCDC65Q8IXS2 484 aa12.24□□□□□ -0.45
NUP85-224ENST00000583948 KCTD17Q8N5Z5 321 aa12.24□□□□□ -0.45
NUP85-224ENST00000583948 SYT2Q8N9I0 419 aaPredicted RBP12.24□□□□□ -0.45
NUP85-224ENST00000583948 CEP76Q8TAP6 659 aa12.24□□□□□ -0.45
NUP85-224ENST00000583948 TMEM131Q92545 1883 aa12.24□□□□□ -0.45
NUP85-224ENST00000583948 FCRL3Q96P31 734 aaPredicted RBP12.24□□□□□ -0.45
NUP85-224ENST00000583948 PANK4Q9NVE7 773 aa12.24□□□□□ -0.45
NUP85-224ENST00000583948 SMPD4Q9NXE4 827 aa12.24□□□□□ -0.45
NUP85-224ENST00000583948 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.24□□□□□ -0.45
NUP85-224ENST00000583948 MAPK8IP1Q9UQF2 711 aa12.24□□□□□ -0.45
NUP85-224ENST00000583948 RAD54BQ9Y620 910 aa12.24□□□□□ -0.45
NUP85-224ENST00000583948 PVALEFA0A1B0GWK0 134 aa12.23□□□□□ -0.45
NUP85-224ENST00000583948 TULP1O00294 542 aaPredicted RBP12.23□□□□□ -0.45
NUP85-224ENST00000583948 CYB561D2O14569 222 aa12.23□□□□□ -0.45
NUP85-224ENST00000583948 TBCAO75347 108 aaKnown RBP12.23□□□□□ -0.45
NUP85-224ENST00000583948 KAT7O95251 611 aa12.23□□□□□ -0.45
NUP85-224ENST00000583948 STX17P56962 302 aa12.23□□□□□ -0.45
NUP85-224ENST00000583948 MRPS21P82921 87 aaKnown RBP12.23□□□□□ -0.45
NUP85-224ENST00000583948 SEMG2Q02383 582 aa12.23□□□□□ -0.45
NUP85-224ENST00000583948 ZNF268Q14587 947 aaPredicted RBP12.23□□□□□ -0.45
NUP85-224ENST00000583948 DHCR24Q15392 516 aa12.23□□□□□ -0.45
NUP85-224ENST00000583948 C9orf57Q5W0N0 161 aa12.23□□□□□ -0.45
NUP85-224ENST00000583948 CNNM4Q6P4Q7 775 aa12.23□□□□□ -0.45
NUP85-224ENST00000583948 DHRS13Q6UX07 377 aa12.23□□□□□ -0.45
NUP85-224ENST00000583948 APBB1IPQ7Z5R6 666 aaPredicted RBP12.23□□□□□ -0.45
NUP85-224ENST00000583948 KIFAP3Q92845 792 aa12.23□□□□□ -0.45
NUP85-224ENST00000583948 HPS3Q969F9 1004 aa12.23□□□□□ -0.45
NUP85-224ENST00000583948 TMEM134Q9H6X4 195 aa12.23□□□□□ -0.45
NUP85-224ENST00000583948 UBQLN1Q9UMX0 589 aaKnown RBP12.23□□□□□ -0.45
NUP85-224ENST00000583948 COL5A1P20908 1838 aaPredicted RBP12.23□□□□□ -0.45
NUP85-224ENST00000583948 TRAV19A0A0A6YYK7 116 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 PPP1R3GB7ZBB8 358 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 LEFTY2O00292 366 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 IKBKBO14920 756 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 SYPP08247 313 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 USP17L7P0C7H9 530 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 NDUFV2P19404 249 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 ERCC5P28715 1186 aaPredicted RBP12.22□□□□□ -0.45
NUP85-224ENST00000583948 PRCPP42785 496 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 CFHR1Q03591 330 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 NR1H3Q13133 447 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 PAK1Q13153 545 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 TPD52L1Q16890 204 aaPredicted RBP12.22□□□□□ -0.45
NUP85-224ENST00000583948 ARSHQ5FYA8 562 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 RHBDF2Q6PJF5 856 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 ADGRG2Q8IZP9 1017 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 ZCCHC9Q8N567 271 aaKnown RBP12.22□□□□□ -0.45
NUP85-224ENST00000583948 NELFBQ8WX92 580 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 WBP2Q969T9 261 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 DNAJC19Q96DA6 116 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 PNKPQ96T60 521 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 ARID3AQ99856 593 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 REEP2Q9BRK0 252 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 GTPBP4Q9BZE4 634 aaKnown RBP12.22□□□□□ -0.45
NUP85-224ENST00000583948 RNF38Q9H0F5 515 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 MIR1-1HGQ9H1L0 117 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 IKZF4Q9H2S9 585 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 GAREM1Q9H706 876 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 SLC39A2Q9NP94 309 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 ARHGEF4Q9NR80 690 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 DKK4Q9UBT3 224 aa12.22□□□□□ -0.45
NUP85-224ENST00000583948 A0A1W2PQF6 199 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 TISP43B9A030 160 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 CBX4O00257 560 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 PIRO00625 290 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 PSMA7O14818 248 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 TRIM66O15016 1216 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 FAM189A1O60320 539 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 FAM13AO94988 1023 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 ADCY5O95622 1261 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 NFATC1O95644 943 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 CYP11A1P05108 521 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 HDCP19113 662 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 DDX6P26196 483 aaKnown RBP eCLIP12.21□□□□□ -0.45
NUP85-224ENST00000583948 USP46P62068 366 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 MCL1Q07820 350 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 CCDC173Q0VFZ6 552 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 NCAPHQ15003 741 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 CT47A1Q5JQC4 288 aaPredicted RBP12.21□□□□□ -0.45
NUP85-224ENST00000583948 EOGTQ5NDL2 527 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 FAM26FQ5R3K3 315 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 SPATA1Q5VX52 437 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 RINT1Q6NUQ1 792 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 LAYNQ6UX15 382 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 SCN4BQ8IWT1 228 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 PHTF2Q8N3S3 785 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 BAHD1Q8TBE0 780 aaPredicted RBP12.21□□□□□ -0.45
NUP85-224ENST00000583948 ENOX1Q8TC92 643 aaKnown RBP12.21□□□□□ -0.45
NUP85-224ENST00000583948 RHBDD1Q8TEB9 315 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 OXCT2Q9BYC2 517 aaPredicted RBP12.21□□□□□ -0.45
NUP85-224ENST00000583948 TRIM5Q9C035 493 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 TBC1D7Q9P0N9 293 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 PCDHB5Q9Y5E4 795 aa12.21□□□□□ -0.45
NUP85-224ENST00000583948 MYH11P35749 1972 aa12.21□□□□□ -0.46
NUP85-224ENST00000583948 MYLKQ15746 1914 aa12.2□□□□□ -0.46
NUP85-224ENST00000583948 WASH3PC4AMC7 463 aa12.2□□□□□ -0.46
NUP85-224ENST00000583948 CLDN3O15551 220 aa12.2□□□□□ -0.46
NUP85-224ENST00000583948 CILPO75339 1184 aa12.2□□□□□ -0.46
NUP85-224ENST00000583948 TOM1L1O75674 476 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms