RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 SPTBN4Q9H254 2564 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CACNA1AO00555 2505 aa9.22□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PLXND1Q9Y4D7 1925 aa9.21□□□□□ -0.93
CDK5RAP3-229ENST00000583697 A0A1B0GVL5 298 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 LNP1A1A4G5 178 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 HOXC11O43248 304 aaPredicted RBP9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 KLRC4O43908 158 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TLR5O60602 858 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 VNN1O95497 513 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 KLF8O95600 359 aaPredicted RBP9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 RPN1P04843 607 aaKnown RBP9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 KRT13P13646 458 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 NR2F2P24468 414 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ADORA2BP29275 332 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 GRIA2P42262 883 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 DHPSP49366 369 aaPredicted RBP9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 NDST1P52848 882 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 MAP3K7CLP57077 242 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 LY6G5CQ5SRR4 150 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 C10orf76Q5T2E6 689 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 SNX30Q5VWJ9 437 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 DAB2IPQ5VWQ8 1189 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 SV2AQ7L0J3 742 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 UNC93AQ86WB7 457 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 BBS7Q8IWZ6 715 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ADGRG2Q8IZP9 1017 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 FUKQ8N0W3 1084 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ZNF513Q8N8E2 541 aaPredicted RBP9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TERB1Q8NA31 727 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 SCAMP5Q8TAC9 235 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TMC2Q8TDI7 906 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ELMO3Q96BJ8 720 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CCDC34Q96HJ3 373 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ZFRQ96KR1 1074 aaKnown RBP9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 GBP4Q96PP9 640 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 KCTD10Q9H3F6 313 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CCSER2Q9H7U1 834 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 MMRN2Q9H8L6 949 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 DEC1Q9P2X7 70 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 HMGXB4Q9UGU5 601 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CHORDC1Q9UHD1 332 aaPredicted RBP9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 INVSQ9Y283 1065 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 SPAG17Q6Q759 2223 aa9.21□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ATG2BQ96BY7 2078 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 EP300Q09472 2414 aaPredicted RBP9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TCRBV21S2A2A0A5A6 115 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 FAM92AA1XBS5 289 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 BCLAF3A2AJT9 711 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TBC1D3BA6NDS4 549 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 NEDD8-MDP1E9PL57 170 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 GOLGA6L22H0YM25 854 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 SGK1O00141 431 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TNFRSF10BO14763 440 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 IKBKBO14920 756 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 KHNYNO15037 678 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 MAP3K13O43283 966 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ASS1P00966 412 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 HLA-DRAP01903 254 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 HOXB2P14652 356 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 BCKDHBP21953 392 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 SYKP43405 635 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ASPAP45381 313 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 SLC6A11P48066 632 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 VAMP7P51809 220 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 BYSLQ13895 437 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ST3GAL2Q16842 350 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 SPOPLQ6IQ16 392 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 PSAPL1Q6NUJ1 521 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 RHBDF2Q6PJF5 856 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TMEM92Q6UXU6 159 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 PAQR9Q6ZVX9 377 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 INTS8Q75QN2 995 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ARMCX6Q7L4S7 300 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 LPCAT2Q7L5N7 544 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 FAM186BQ8IYM0 893 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 NAT16Q8N8M0 369 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 IL17RCQ8NAC3 791 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TMEM174Q8WUU8 243 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 HMGB4Q8WW32 186 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 XPO6Q96QU8 1125 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 SMOQ99835 787 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 DUSP9Q99956 384 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 NT5C1AQ9BXI3 368 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 NIF3L1Q9GZT8 377 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CSNK1G1Q9HCP0 422 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ZDHHC4Q9NPG8 344 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TMEM9BQ9NQ34 198 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.2□□□□□ -0.943e-6■■■■■ 28.8
CDK5RAP3-229ENST00000583697 SPHK2Q9NRA0 654 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 DNAJC17Q9NVM6 304 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 DMAC2Q9NW81 257 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ANGPTL2Q9UKU9 493 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TRAF3IP3Q9Y228 551 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 PCDHA5Q9Y5H7 936 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 NUP205Q92621 2012 aa9.2□□□□□ -0.94
CDK5RAP3-229ENST00000583697 THADAQ6YHU6 1953 aa9.19□□□□□ -0.94
CDK5RAP3-229ENST00000583697 MAPK13O15264 365 aa9.19□□□□□ -0.94
CDK5RAP3-229ENST00000583697 ZBTB24O43167 697 aaPredicted RBP9.19□□□□□ -0.94
CDK5RAP3-229ENST00000583697 CYP26A1O43174 497 aa9.19□□□□□ -0.94
CDK5RAP3-229ENST00000583697 TULP3O75386 442 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms