RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 RITA1Q96K30 269 aa4.33□□□□□ -1.72
VAPA-206ENST00000583475 HIST1H2AAQ96QV6 131 aa4.33□□□□□ -1.72
VAPA-206ENST00000583475 NAA15Q9BXJ9 866 aaKnown RBP4.33□□□□□ -1.72
VAPA-206ENST00000583475 PNPLA8Q9NP80 782 aa4.33□□□□□ -1.72
VAPA-206ENST00000583475 ASIC5Q9NY37 505 aa4.33□□□□□ -1.72
VAPA-206ENST00000583475 MGAT4CQ9UBM8 478 aa4.33□□□□□ -1.72
VAPA-206ENST00000583475 VPS51Q9UID3 782 aa4.33□□□□□ -1.72
VAPA-206ENST00000583475 RIMKLBQ9ULI2 386 aa4.33□□□□□ -1.72
VAPA-206ENST00000583475 TNFRSF18Q9Y5U5 241 aa4.33□□□□□ -1.72
VAPA-206ENST00000583475 A0A087WZ62 844 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 DNAJC9-AS1A6NH13 148 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 KPNA5O15131 536 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 PRIM2P49643 509 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 SUMO2P61956 95 aaKnown RBP4.32□□□□□ -1.72
VAPA-206ENST00000583475 SAFBQ15424 915 aaKnown RBP eCLIP4.32□□□□□ -1.72
VAPA-206ENST00000583475 CEP78Q5JTW2 689 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 RRAGBQ5VZM2 374 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 CATSPERGQ6ZRH7 1159 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 KRT28Q7Z3Y7 464 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 PJA1Q8NG27 643 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 IQCDQ96DY2 449 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 ZDHHC12Q96GR4 267 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 ZNF668Q96K58 619 aaPredicted RBP4.32□□□□□ -1.72
VAPA-206ENST00000583475 FAM227BQ96M60 508 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 ASB2Q96Q27 587 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 TBCBQ99426 244 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 SELENOOQ9BVL4 669 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 QTRT1Q9BXR0 403 aaKnown RBP4.32□□□□□ -1.72
VAPA-206ENST00000583475 GJB4Q9NTQ9 266 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 GEMIN8Q9NWZ8 242 aaKnown RBP4.32□□□□□ -1.72
VAPA-206ENST00000583475 TFCP2L1Q9NZI6 479 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 DNAJB11Q9UBS4 358 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 NKX1-2Q9UD57 310 aaPredicted RBP4.32□□□□□ -1.72
VAPA-206ENST00000583475 HPSEQ9Y251 543 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 SLC27A6Q9Y2P4 619 aa4.32□□□□□ -1.72
VAPA-206ENST00000583475 POM121BA6NF01 834 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 PPP6CO00743 305 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 THAP12O43422 761 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 MT-CO3P00414 261 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 CYP2D6P10635 497 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 TSHRP16473 764 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 MPGP29372 298 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 MCM5P33992 734 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 MTHFSP49914 203 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 COPAP53621 1224 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 SSBP2P81877 361 aaPredicted RBP4.31□□□□□ -1.72
VAPA-206ENST00000583475 DEUP1Q05D60 604 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 HLTFQ14527 1009 aaKnown RBP eCLIP4.31□□□□□ -1.72
VAPA-206ENST00000583475 MZT2AQ6P582 158 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 CLEC9AQ6UXN8 241 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 LINC01465Q8N7H1 131 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 C8orf58Q8NAV2 365 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 ADAMTS18Q8TE60 1221 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 MMS19Q96T76 1030 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 SH2D3AQ9BRG2 576 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 SEMA4CQ9C0C4 833 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 GAR1Q9NY12 217 aaKnown RBP4.31□□□□□ -1.72
VAPA-206ENST00000583475 ASAP1Q9ULH1 1129 aa4.31□□□□□ -1.72
VAPA-206ENST00000583475 COL15A1P39059 1388 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 CLCA1A8K7I4 914 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 A8MVJ9 347 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 PMM2O15305 246 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 KCNQ3O43525 872 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 SNX2O60749 519 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 TUBB4AP04350 444 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 CHRM5P08912 532 aaPredicted RBP4.3□□□□□ -1.72
VAPA-206ENST00000583475 PRR35P0CG20 571 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 CYP2A6P11509 494 aaPredicted RBP4.3□□□□□ -1.72
VAPA-206ENST00000583475 APEHP13798 732 aaKnown RBP4.3□□□□□ -1.72
VAPA-206ENST00000583475 CD19P15391 556 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 PHKG2P15735 406 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 ATF7P17544 494 aaPredicted RBP4.3□□□□□ -1.72
VAPA-206ENST00000583475 CERS1P27544 350 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 HTR7P34969 479 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 GNALP38405 381 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 STT3AP46977 705 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 COPB1P53618 953 aaKnown RBP4.3□□□□□ -1.72
VAPA-206ENST00000583475 KRTAP1-1Q07627 177 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 SRSF7Q16629 238 aaKnown RBP eCLIP4.3□□□□□ -1.72
VAPA-206ENST00000583475 FAM187BQ17R55 369 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 SERPINA13PQ6UXR4 307 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 LIX1LQ8IVB5 337 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 KAZALD1Q96I82 304 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 CCDC17Q96LX7 622 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 C5orf34Q96MH7 638 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 COLEC11Q9BWP8 271 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 STEAP1Q9UHE8 339 aa4.3□□□□□ -1.72
VAPA-206ENST00000583475 A0A1W2PPC4 97 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 WDR91A4D1P6 747 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 BTBD19C9JJ37 291 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 UBE2Q2LH0YL09 131 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 H3BNC9 293 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 INO80B-WBP1J3KQ70 363 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 TMPRSS11DO60235 418 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 FGFR2P21802 821 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 ATICP31939 592 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 MTAPQ13126 283 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 CLCA4Q14CN2 919 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 MTX3Q5HYI7 312 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 KIAA0408Q6ZU52 694 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms