RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 B3GNT5Q9BYG0 378 aa14.41□□□□□ -0.1
SS18-222ENST00000582792 CHMP5Q9NZZ3 219 aa14.41□□□□□ -0.1
SS18-222ENST00000582792 RCOR1Q9UKL0 485 aa14.41□□□□□ -0.1
SS18-222ENST00000582792 CACNA1EQ15878 2313 aa14.41□□□□□ -0.1
SS18-222ENST00000582792 MYO18AQ92614 2054 aaKnown RBP14.4□□□□□ -0.1
SS18-222ENST00000582792 SPAARA0A1B0GVQ0 90 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 TBC1D3BA6NDS4 549 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 CLDN5O00501 218 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 SPTLC2O15270 562 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 HOXC11O43248 304 aaPredicted RBP14.4□□□□□ -0.1
SS18-222ENST00000582792 TULP3O75386 442 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 RTN3O95197 1032 aaPredicted RBP14.4□□□□□ -0.1
SS18-222ENST00000582792 CFIP05156 583 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 DLATP10515 647 aaKnown RBP14.4□□□□□ -0.1
SS18-222ENST00000582792 ATXN3P54252 364 aaPredicted RBP14.4□□□□□ -0.1
SS18-222ENST00000582792 TNNC1P63316 161 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 KRT85P78386 507 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 SIM1P81133 766 aaPredicted RBP14.4□□□□□ -0.1
SS18-222ENST00000582792 DNM1Q05193 864 aaKnown RBP14.4□□□□□ -0.1
SS18-222ENST00000582792 SNRNP35Q16560 246 aaKnown RBP14.4□□□□□ -0.1
SS18-222ENST00000582792 WDR72Q3MJ13 1102 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 PREPLQ4J6C6 727 aaPredicted RBP14.4□□□□□ -0.1
SS18-222ENST00000582792 SNX30Q5VWJ9 437 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 BTBD8Q5XKL5 378 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 TRMT11Q7Z4G4 463 aaKnown RBP14.4□□□□□ -0.1
SS18-222ENST00000582792 ZNF513Q8N8E2 541 aaPredicted RBP14.4□□□□□ -0.1
SS18-222ENST00000582792 HPS3Q969F9 1004 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 FBXO32Q969P5 355 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 CGRRF1Q99675 332 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 FSCN3Q9NQT6 498 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 DEC1Q9P2X7 70 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 TFIP11Q9UBB9 837 aaKnown RBP14.4□□□□□ -0.1
SS18-222ENST00000582792 KLK13Q9UKR3 277 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 SLC6A14Q9UN76 642 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 MSRB2Q9Y3D2 182 aa14.4□□□□□ -0.1
SS18-222ENST00000582792 CEP192Q8TEP8 1941 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 A8MXQ7 604 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 EIF3DO15371 548 aaKnown RBP eCLIP14.39□□□□□ -0.11
SS18-222ENST00000582792 STAU1O95793 577 aaKnown RBP14.39□□□□□ -0.11
SS18-222ENST00000582792 SERPINF2P08697 491 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 HOXB3P14651 431 aaPredicted RBP14.39□□□□□ -0.11
SS18-222ENST00000582792 GABRG2P18507 467 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 TNNI1P19237 187 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 TUBP50607 506 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 RPL6Q02878 288 aaKnown RBP14.39□□□□□ -0.11
SS18-222ENST00000582792 GFPT1Q06210 699 aaPredicted RBP14.39□□□□□ -0.11
SS18-222ENST00000582792 COL9A2Q14055 689 aaPredicted RBP14.39□□□□□ -0.11
SS18-222ENST00000582792 PSMD6Q15008 389 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 HECTD3Q5T447 861 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 SLC36A4Q6YBV0 504 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 NUDT18Q6ZVK8 323 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 RABEPKQ7Z6M1 372 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 HDDC3Q8N4P3 179 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 PDILTQ8N807 584 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 NAT16Q8N8M0 369 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 TERB1Q8NA31 727 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 RDH13Q8NBN7 331 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 B3GALNT2Q8NCR0 500 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 GTPBP2Q9BX10 602 aaKnown RBP14.39□□□□□ -0.11
SS18-222ENST00000582792 SCAND2PQ9GZW5 306 aaPredicted RBP14.39□□□□□ -0.11
SS18-222ENST00000582792 TNMDQ9H2S6 317 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 CAPN10Q9HC96 672 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 SPHK2Q9NRA0 654 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 AGPAT3Q9NRZ7 376 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 CALCOCO1Q9P1Z2 691 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 CHORDC1Q9UHD1 332 aaPredicted RBP14.39□□□□□ -0.11
SS18-222ENST00000582792 SH3BP1Q9Y3L3 701 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 PCDH15Q96QU1 1955 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 ADAMTS9Q9P2N4 1935 aa14.39□□□□□ -0.11
SS18-222ENST00000582792 H0Y626 953 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 TGFB1I1O43294 461 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 CUTAO60888 179 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 TRIM16O95361 564 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 HOXB2P14652 356 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 NTSR1P30989 418 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 ZNF33AQ06730 810 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 CYP24A1Q07973 514 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 C10orf76Q5T2E6 689 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 EPM2AIP1Q7L775 607 aaPredicted RBP14.38□□□□□ -0.11
SS18-222ENST00000582792 TMEM25Q86YD3 366 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 BBS7Q8IWZ6 715 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 SCAMP5Q8TAC9 235 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 ZNF507Q8TCN5 953 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 CCDC127Q96BQ5 260 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 KCNK16Q96T55 309 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 TRIM9Q9C026 710 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 LRRC27Q9C0I9 530 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 CCSER2Q9H7U1 834 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 KBTBD4Q9NVX7 518 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 IL37Q9NZH6 218 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 HCN2Q9UL51 889 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 STARD13Q9Y3M8 1113 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 ATP8B3O60423 1300 aa14.38□□□□□ -0.11
SS18-222ENST00000582792 IGHV1OR15-9A0A0B4J2B8 117 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 A0A1W2PQF6 199 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 FAM92AA1XBS5 289 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 FAM221BA6H8Z2 402 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 OPHN1O60890 802 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 ZDHHC11BP0C7U3 371 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 ATICP31939 592 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms