RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 KLC4Q9NSK0 619 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 NKIRAS1Q9NYS0 192 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 USP15Q9Y4E8 981 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SNX10Q9Y5X0 201 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 FAM47DPA6NHR8 397 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MCF2LO15068 1137 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PRPSAP2O60256 369 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 RASSF9O75901 435 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 METTL18O95568 372 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 APRTP07741 180 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 KRT7P08729 469 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CTSHP09668 335 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CYP2C9P11712 490 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CYP2B6P20813 491 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CAV1Q03135 178 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 FAAP100Q0VG06 881 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ZNF268Q14587 947 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 STAT4Q14765 748 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 DPY19L2Q6NUT2 758 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TRMT10BQ6PF06 316 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CDHR3Q6ZTQ4 885 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 HFE2Q6ZVN8 426 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 OSTM1Q86WC4 334 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PPIL6Q8IXY8 311 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 STKLD1Q8NE28 680 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 P3H4Q92791 437 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 FAF2Q96CS3 445 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TRIM6Q9C030 488 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ECT2Q9H8V3 914 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SMYD2Q9NRG4 433 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 DCTN4Q9UJW0 460 aa11.15□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CCDC195A0A1B0GUA6 201 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 APOC4-APOC2K7ER74 178 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ASMTLO95671 621 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 APOC2P02655 101 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 AMPD1P23109 780 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SLC26A2P50443 739 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 GTF2A2P52657 109 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 NCALDP61601 193 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 IRX4P78413 519 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 LCLAT1Q6UWP7 414 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 YTHDF3Q7Z739 585 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PALM2Q8IXS6 379 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SNX27Q96L92 541 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 LGMNQ99538 433 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PAAF1Q9BRP4 392 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TINF2Q9BSI4 451 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 STMN4Q9H169 189 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 USP29Q9HBJ7 922 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TMEM30AQ9NV96 361 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 DRG1Q9Y295 367 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TCRBV9S1A1TA0A576 114 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 MYL3P08590 195 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 GOT1P17174 413 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 GABRB2P47870 512 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ERFP50548 548 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PGGT1BP53609 377 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TNFAIP2Q03169 654 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 INCA1Q0VD86 236 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PLEKHG4Q58EX7 1191 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 KIAA0319Q5VV43 1072 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 C9orf57Q5W0N0 161 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ZNF449Q6P9G9 518 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CES3Q6UWW8 571 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 POLNQ7Z5Q5 900 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CTAGE3PQ8IX95 158 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 RNF169Q8NCN4 708 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 RFWD2Q8NHY2 731 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TCP10LQ8TDR4 215 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 DENND1AQ8TEH3 1009 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 DEPDC1BQ8WUY9 529 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 DCAKDQ8WVC6 231 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 WNT8BQ93098 351 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 RNF157Q96PX1 679 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TBCBQ99426 244 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CNPY3Q9BT09 278 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PITPNM3Q9BZ71 974 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CCDC134Q9H6E4 229 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 NPHS2Q9NP85 383 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 L3MBTL1Q9Y468 752 aa11.14□□□□□ -0.63
CDK5RAP3-225ENST00000582482 IGF2BP3O00425 579 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 KRT16P08779 473 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 RARBP10826 455 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TARSP26639 723 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CACNA2D1P54289 1103 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SPARCL1Q14515 664 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 NOMO1Q15155 1222 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TAZQ16635 292 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 FAM187BQ17R55 369 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 DUSP28Q4G0W2 176 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CES4AQ5XG92 561 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 DRICH1Q6PGQ1 229 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 USP50Q70EL3 339 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 LRRC6Q86X45 466 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ANKS4BQ8N8V4 417 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 HASPINQ8TF76 798 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 FAM149B1Q96BN6 582 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 KCTD15Q96SI1 283 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 MYLK2Q9H1R3 596 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms