RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 NAA15Q9BXJ9 866 aaKnown RBP10.97□□□□□ -0.65
TOP3A-212ENST00000582122 EDEM3Q9BZQ6 932 aa10.97□□□□□ -0.65
TOP3A-212ENST00000582122 LHX5Q9H2C1 402 aa10.97□□□□□ -0.65
TOP3A-212ENST00000582122 C8orf33Q9H7E9 229 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-212ENST00000582122 RTN4Q9NQC3 1192 aaKnown RBP10.97□□□□□ -0.65
TOP3A-212ENST00000582122 FAM207AQ9NSI2 230 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-212ENST00000582122 OLA1Q9NTK5 396 aaKnown RBP10.97□□□□□ -0.65
TOP3A-212ENST00000582122 SIK3Q9Y2K2 1263 aa10.97□□□□□ -0.65
TOP3A-212ENST00000582122 MRPS17Q9Y2R5 130 aaKnown RBP10.97□□□□□ -0.65
TOP3A-212ENST00000582122 GREB1Q4ZG55 1949 aa10.97□□□□□ -0.65
TOP3A-212ENST00000582122 DENND4CQ5VZ89 1909 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 A0A1B0GTH6 734 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 F8VZ95 297 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 MAN2B1O00754 1011 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 TLR5O60602 858 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 GFRA3O60609 400 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 LSM8O95777 96 aaKnown RBP10.96□□□□□ -0.65
TOP3A-212ENST00000582122 ATP1A3P13637 1013 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 STAT1P42224 750 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 TKTL1P51854 596 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 KPNA1P52294 538 aaPredicted RBP10.96□□□□□ -0.65
TOP3A-212ENST00000582122 NUBP1P53384 320 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 POLR2FP61218 127 aaKnown RBP10.96□□□□□ -0.65
TOP3A-212ENST00000582122 GPC5P78333 572 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 NR1H3Q13133 447 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 STXBP5Q5T5C0 1151 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 GJB7Q6PEY0 223 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 VITQ6UXI7 678 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 APTXQ7Z2E3 356 aaKnown RBP10.96□□□□□ -0.65
TOP3A-212ENST00000582122 CACNA2D4Q7Z3S7 1137 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 ARL14EPQ8N8R7 260 aaPredicted RBP10.96□□□□□ -0.65
TOP3A-212ENST00000582122 RSAD2Q8WXG1 361 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 USP13Q92995 863 aaPredicted RBP10.96□□□□□ -0.65
TOP3A-212ENST00000582122 SECISBP2LQ93073 1101 aaKnown RBP10.96□□□□□ -0.65
TOP3A-212ENST00000582122 OTUB2Q96DC9 234 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 PHOX2BQ99453 314 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 NUP58Q9BVL2 599 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 NUCKS1Q9H1E3 243 aaKnown RBP10.96□□□□□ -0.65
TOP3A-212ENST00000582122 PDCL3Q9H2J4 239 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 MFSD1Q9H3U5 465 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 GMIPQ9P107 970 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 TBC1D14Q9P2M4 693 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 CHORDC1Q9UHD1 332 aaPredicted RBP10.96□□□□□ -0.65
TOP3A-212ENST00000582122 DNMT3LQ9UJW3 386 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 NAGPAQ9UK23 515 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 STRIP2Q9ULQ0 834 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 FHOD1Q9Y613 1164 aa10.96□□□□□ -0.65
TOP3A-212ENST00000582122 RIF1Q5UIP0 2472 aaKnown RBP10.96□□□□□ -0.66
TOP3A-212ENST00000582122 FAM186AA6NE01 2351 aa10.96□□□□□ -0.66
TOP3A-212ENST00000582122 ZNF638Q14966 1978 aaKnown RBP10.96□□□□□ -0.66
TOP3A-212ENST00000582122 NUP210Q8TEM1 1887 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-212ENST00000582122 E2F8A0AVK6 867 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 C2orf78A6NCI8 922 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 CYP26A1O43174 497 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 CBFA2T2O43439 604 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 MBL2P11226 248 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-212ENST00000582122 GDI1P31150 447 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 SOX5P35711 763 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 VIPR2P41587 438 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 GPD2P43304 727 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 RPL34P49207 117 aaKnown RBP10.95□□□□□ -0.66
TOP3A-212ENST00000582122 UBASH3AP57075 661 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 ZNF445P59923 1031 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 COG7P83436 770 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 TCF15Q12870 199 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 MTF1Q14872 753 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 DPY19L2P1Q6NXN4 242 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 PPP1R2P3Q6NXS1 205 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 TRIM72Q6ZMU5 477 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 RSRC2Q7L4I2 434 aaKnown RBP10.95□□□□□ -0.66
TOP3A-212ENST00000582122 BEND5Q7L4P6 421 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 LUZP1Q86V48 1076 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 ZDHHC17Q8IUH5 632 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 TMEM35BQ8NCS4 154 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 UBA3Q8TBC4 463 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 IPO4Q8TEX9 1081 aaKnown RBP10.95□□□□□ -0.66
TOP3A-212ENST00000582122 RNF139Q8WU17 664 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 ATP2A3Q93084 1043 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 GANQ9H2C0 597 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 ARHGEF3Q9NR81 526 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 ABCC13Q9NSE7 274 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.95□□□□□ -0.66
TOP3A-212ENST00000582122 LSM7Q9UK45 103 aaKnown RBP10.95□□□□□ -0.66
TOP3A-212ENST00000582122 ZNF510Q9Y2H8 683 aa10.95□□□□□ -0.66
TOP3A-212ENST00000582122 PATJQ8NI35 1801 aa10.94□□□□□ -0.66
TOP3A-212ENST00000582122 NCAM2O15394 837 aa10.94□□□□□ -0.66
TOP3A-212ENST00000582122 COCHO43405 550 aa10.94□□□□□ -0.66
TOP3A-212ENST00000582122 PRAMEF12O95522 483 aa10.94□□□□□ -0.66
TOP3A-212ENST00000582122 GLI1P08151 1106 aa10.94□□□□□ -0.66
TOP3A-212ENST00000582122 CFHP08603 1231 aa10.94□□□□□ -0.66
TOP3A-212ENST00000582122 CYP11B1P15538 503 aa10.94□□□□□ -0.66
TOP3A-212ENST00000582122 CLCN1P35523 988 aa10.94□□□□□ -0.66
TOP3A-212ENST00000582122 MAGEA9P43362 315 aa10.94□□□□□ -0.66
TOP3A-212ENST00000582122 IFNAR2P48551 515 aa10.94□□□□□ -0.66
TOP3A-212ENST00000582122 CLCN5P51795 746 aa10.94□□□□□ -0.66
TOP3A-212ENST00000582122 YWHAGP61981 247 aaKnown RBP eCLIP10.94□□□□□ -0.66
TOP3A-212ENST00000582122 FANCCQ00597 558 aa10.94□□□□□ -0.66
TOP3A-212ENST00000582122 ADIGQ0VDE8 80 aa10.94□□□□□ -0.66
TOP3A-212ENST00000582122 USP4Q13107 963 aa10.94□□□□□ -0.66
TOP3A-212ENST00000582122 MTA1Q13330 715 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms