RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 DUSP12Q9UNI6 340 aa14.22□□□□□ -0.13
CSNK1D-220ENST00000581737 R4GN57 208 aa14.22□□□□□ -0.13
CSNK1D-220ENST00000581737 DENND4AQ7Z401 1863 aa14.22□□□□□ -0.13
CSNK1D-220ENST00000581737 MYO10Q9HD67 2058 aa14.22□□□□□ -0.13
CSNK1D-220ENST00000581737 CLUHO75153 1309 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 KRBA1A5PL33 1030 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 O00370 1275 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 FOXN3O00409 490 aaPredicted RBP14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 ZNF197O14709 1029 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 THAP12O43422 761 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 SETSIPP0DME0 302 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 MAGEA1P43355 309 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 CDR1P51861 262 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 CNGA2Q16280 664 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 SLC18A3Q16572 532 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 DDR2Q16832 855 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 PABPC1LQ4VXU2 614 aaKnown RBP14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 CYP4A22Q5TCH4 519 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 LCLAT1Q6UWP7 414 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 PAQR9Q6ZVX9 377 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 PLCD3Q8N3E9 789 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 ANKRD52Q8NB46 1076 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 MNS1Q8NEH6 495 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 TRIM58Q8NG06 486 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 SECISBP2LQ93073 1101 aaKnown RBP14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 TRMT2BQ96GJ1 504 aaKnown RBP14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 CALR3Q96L12 384 aaKnown RBP14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 GCNAQ96QF7 691 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 NAPGQ99747 312 aaPredicted RBP14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 CORO1BQ9BR76 489 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 DUSP16Q9BY84 665 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 CSNK1G1Q9HCP0 422 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 WDR6Q9NNW5 1121 aaKnown RBP14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 UXTQ9UBK9 157 aaPredicted RBP14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 TSPAN16Q9UKR8 245 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 PCDHA13Q9Y5I0 950 aa14.21□□□□□ -0.13
CSNK1D-220ENST00000581737 GREB1Q4ZG55 1949 aa14.21□□□□□ -0.14
CSNK1D-220ENST00000581737 SLC38A8A6NNN8 435 aa14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 DYNC1I1O14576 645 aa14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 CYP26A1O43174 497 aa14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 RTN3O95197 1032 aaPredicted RBP14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 SLU7O95391 586 aaKnown RBP14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 RHOP08100 348 aa14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 BRD2P25440 801 aaKnown RBP14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 PDE6CP51160 858 aa14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 EPHA5P54756 1037 aa14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 MAP3K7CLP57077 242 aa14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 JAM2P57087 298 aa14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 BST2Q10589 180 aaKnown RBP14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 ZNF569Q5MCW4 686 aa14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 DENND5BQ6ZUT9 1274 aa14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 PDZD4Q76G19 769 aaPredicted RBP14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 GRASPQ7Z6J2 395 aaPredicted RBP14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 DNAJB7Q7Z6W7 309 aaPredicted RBP14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 KIAA2013Q8IYS2 634 aa14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 RNF10Q8N5U6 811 aaKnown RBP14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 GIPC2Q8TF65 315 aa14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 GPR88Q9GZN0 384 aa14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 COMMD8Q9NX08 183 aa14.2□□□□□ -0.14
CSNK1D-220ENST00000581737 M0QYV0 167 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 RIOK3O14730 519 aaKnown RBP14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 PJA2O43164 708 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 URI1O94763 535 aaPredicted RBP14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 CFHP08603 1231 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 FSHRP23945 695 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 CDC25CP30307 473 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 GPR15P49685 360 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 HGSNATQ68CP4 663 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 CLEC20AQ6ZU45 233 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 NUP93Q8N1F7 819 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 ST13P5Q8NFI4 369 aaPredicted RBP14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 TFAP2BQ92481 460 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 MYRFLQ96LU7 910 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 SMOQ99835 787 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 UBXN6Q9BZV1 441 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 DNMT3BQ9UBC3 853 aaKnown RBP14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 INTUQ9ULD6 942 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 GUCA1BQ9UMX6 200 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 MRPS23Q9Y3D9 190 aaKnown RBP14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 CEP83Q9Y592 693 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 ZNF638Q14966 1978 aaKnown RBP14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 DOCK6Q96HP0 2047 aa14.19□□□□□ -0.14
CSNK1D-220ENST00000581737 XPO1O14980 1071 aaKnown RBP14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 MICAL2O94851 1124 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 PNMA6AP0CW24 399 aaPredicted RBP14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 MYL4P12829 197 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 CACNA2D1P54289 1103 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 ARID5AQ03989 594 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 SDHAF4Q5VUM1 108 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 PPP1R2P3Q6NXS1 205 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 OTOP3Q7RTS5 596 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 TTC30AQ86WT1 665 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 ZNF677Q86XU0 584 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 TMC8Q8IU68 726 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 DCLK2Q8N568 766 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 PDZD8Q8NEN9 1154 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 GPR152Q8TDT2 470 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 UBE2Q2Q8WVN8 375 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms