RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 HSP90AA4PQ58FG1 418 aa13.3□□□□□ -0.28
SNORD55-201ENST00000581525 ZNF852Q6ZMS4 543 aa13.3□□□□□ -0.28
SNORD55-201ENST00000581525 RALGPS2Q86X27 583 aaPredicted RBP13.3□□□□□ -0.28
SNORD55-201ENST00000581525 DDX42Q86XP3 938 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNORD55-201ENST00000581525 ADGRG2Q8IZP9 1017 aa13.3□□□□□ -0.28
SNORD55-201ENST00000581525 PJA1Q8NG27 643 aa13.3□□□□□ -0.28
SNORD55-201ENST00000581525 CHFRQ96EP1 664 aa13.3□□□□□ -0.28
SNORD55-201ENST00000581525 NAT10Q9H0A0 1025 aaKnown RBP13.3□□□□□ -0.28
SNORD55-201ENST00000581525 MFSD1Q9H3U5 465 aa13.3□□□□□ -0.28
SNORD55-201ENST00000581525 CCSER2Q9H7U1 834 aa13.3□□□□□ -0.28
SNORD55-201ENST00000581525 TRPC7Q9HCX4 862 aa13.3□□□□□ -0.28
SNORD55-201ENST00000581525 LTB4R2Q9NPC1 389 aa13.3□□□□□ -0.28
SNORD55-201ENST00000581525 DNAJC12Q9UKB3 198 aa13.3□□□□□ -0.28
SNORD55-201ENST00000581525 AJAP1Q9UKB5 411 aaPredicted RBP13.3□□□□□ -0.28
SNORD55-201ENST00000581525 PCDHGC3Q9UN70 934 aa13.3□□□□□ -0.28
SNORD55-201ENST00000581525 SIT1Q9Y3P8 196 aa13.3□□□□□ -0.28
SNORD55-201ENST00000581525 A0A1W2PQH9 124 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 OTOL1A6NHN0 477 aaPredicted RBP13.29□□□□□ -0.28
SNORD55-201ENST00000581525 FOXN3O00409 490 aaPredicted RBP13.29□□□□□ -0.28
SNORD55-201ENST00000581525 CYP26A1O43174 497 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 TLR5O60602 858 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 ZBED1O96006 694 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 UCHL3P15374 230 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 BRD2P25440 801 aaKnown RBP13.29□□□□□ -0.28
SNORD55-201ENST00000581525 TKTL1P51854 596 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 COPB1P53618 953 aaKnown RBP13.29□□□□□ -0.28
SNORD55-201ENST00000581525 ITPRIPL2Q3MIP1 535 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 ANO6Q4KMQ2 910 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 PMF1Q6P1K2 205 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 HTR3DQ70Z44 454 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 DHX40Q8IX18 779 aaKnown RBP13.29□□□□□ -0.28
SNORD55-201ENST00000581525 CCDC105Q8IYK2 499 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 ARHGAP18Q8N392 663 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 UBA3Q8TBC4 463 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 CSGALNACT1Q8TDX6 532 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 IRGQQ8WZA9 623 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 ERGIC2Q96RQ1 377 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 CDK5RAP1Q96SZ6 601 aaKnown RBP13.29□□□□□ -0.28
SNORD55-201ENST00000581525 KLF16Q9BXK1 252 aaPredicted RBP13.29□□□□□ -0.28
SNORD55-201ENST00000581525 VPS16Q9H269 839 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 LHX5Q9H2C1 402 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 CNGB3Q9NQW8 809 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 TAB2Q9NYJ8 693 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 SIK3Q9Y2K2 1263 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 MRPS17Q9Y2R5 130 aaKnown RBP13.29□□□□□ -0.28
SNORD55-201ENST00000581525 CPQQ9Y646 472 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 F5P12259 2224 aa13.29□□□□□ -0.28
SNORD55-201ENST00000581525 SMTNL1A8MU46 457 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 MED7O43513 233 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 GALR2O43603 387 aaPredicted RBP13.28□□□□□ -0.28
SNORD55-201ENST00000581525 RARGP13631 454 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 ATP5C1P36542 298 aaKnown RBP13.28□□□□□ -0.28
SNORD55-201ENST00000581525 TNK2Q07912 1038 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 IFRD2Q12894 506 aaPredicted RBP13.28□□□□□ -0.28
SNORD55-201ENST00000581525 TPRG1Q6ZUI0 275 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 BEND5Q7L4P6 421 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 TMEM110Q86TL2 294 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 WDTC1Q8N5D0 677 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 FLCNQ8NFG4 579 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 OTUB2Q96DC9 234 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 ZFYVE19Q96K21 471 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 SLC4A5Q9BY07 1137 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 STK33Q9BYT3 514 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 GANQ9H2C0 597 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 LINC00597Q9H2U6 94 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 GTSE1Q9NYZ3 720 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 MTF2Q9Y483 593 aaPredicted RBP13.28□□□□□ -0.28
SNORD55-201ENST00000581525 PIAS3Q9Y6X2 628 aa13.28□□□□□ -0.28
SNORD55-201ENST00000581525 FAM170BA6NMN3 283 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 LGALS16A8MUM7 142 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 SPECC1L-ADORA2AF8WAN1 911 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 TRDMT1O14717 391 aaKnown RBP13.27□□□□□ -0.29
SNORD55-201ENST00000581525 SLC9A3R1O14745 358 aaPredicted RBP13.27□□□□□ -0.29
SNORD55-201ENST00000581525 NCAM2O15394 837 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 CAVIN2O95810 425 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 TBX18O95935 607 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 ABL1P00519 1130 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 CALCAP01258 141 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 KRT5P13647 590 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 TARSP26639 723 aaKnown RBP13.27□□□□□ -0.29
SNORD55-201ENST00000581525 GNA15P30679 374 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 CTHP32929 405 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 ZNF165P49910 485 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 DAOAP59103 153 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 BPIFB4P59827 614 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 PTK2Q05397 1052 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 DRAP1Q14919 205 aaPredicted RBP13.27□□□□□ -0.29
SNORD55-201ENST00000581525 ARHGAP44Q17R89 818 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 GAB4Q2WGN9 574 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 CC2D1AQ6P1N0 951 aaPredicted RBP13.27□□□□□ -0.29
SNORD55-201ENST00000581525 TADA2BQ86TJ2 420 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 AOPEPQ8N6M6 819 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 FAM3CQ92520 227 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 SECISBP2LQ93073 1101 aaKnown RBP13.27□□□□□ -0.29
SNORD55-201ENST00000581525 ATP2A3Q93084 1043 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 IER2Q9BTL4 223 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 ULBP1Q9BZM6 244 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 FOXQ1Q9C009 403 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 ECT2Q9H8V3 914 aa13.27□□□□□ -0.29
SNORD55-201ENST00000581525 DUS2Q9NX74 493 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms