RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 RTN3O95197 1032 aaPredicted RBP10.55□□□□□ -0.72
RFFL-208ENST00000581039 FTH1P19P0C7X4 201 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 TXLNAP40222 546 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 SOWAHCQ53LP3 525 aaPredicted RBP10.55□□□□□ -0.72
RFFL-208ENST00000581039 WDR45BQ5MNZ6 344 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 GRAMD4Q6IC98 578 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 BRAPQ7Z569 592 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 PDZD3Q86UT5 571 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 TMEM25Q86YD3 366 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 WDR49Q8IV35 697 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 SLC41A1Q8IVJ1 513 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 BBS7Q8IWZ6 715 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 PNPLA1Q8N8W4 532 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 TERB1Q8NA31 727 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 SPRYD3Q8NCJ5 442 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 IPO4Q8TEX9 1081 aaKnown RBP10.55□□□□□ -0.72
RFFL-208ENST00000581039 OVCA2Q8WZ82 227 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 FOXJ1Q92949 421 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 FBXO32Q969P5 355 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 ZNF419Q96HQ0 510 aaPredicted RBP10.55□□□□□ -0.72
RFFL-208ENST00000581039 TMX3Q96JJ7 454 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 ZNF518BQ9C0D4 1074 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 NACA2Q9H009 215 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 PANK4Q9NVE7 773 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 CYP8B1Q9UNU6 501 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 SMC3Q9UQE7 1217 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 APOBEC2Q9Y235 224 aaKnown RBP10.55□□□□□ -0.72
RFFL-208ENST00000581039 STARD13Q9Y3M8 1113 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 PTPRJQ12913 1337 aa10.55□□□□□ -0.72
RFFL-208ENST00000581039 PTPRDP23468 1912 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 A0A1W2PQF6 199 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 A8MXQ7 604 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 TRIM24O15164 1050 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 CST3P01034 146 aaPredicted RBP10.54□□□□□ -0.72
RFFL-208ENST00000581039 TNNI1P19237 187 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 NDUFV2P19404 249 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 CACNA2D1P54289 1103 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 TNNC1P63316 161 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 COL28A1Q2UY09 1125 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 WDR72Q3MJ13 1102 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 CCNI2Q6ZMN8 369 aaPredicted RBP10.54□□□□□ -0.72
RFFL-208ENST00000581039 STXBP4Q6ZWJ1 553 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 TRAPPC11Q7Z392 1133 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 MIB1Q86YT6 1006 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 CBWD2Q8IUF1 395 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 NAXDQ8IW45 347 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 SCFD1Q8WVM8 642 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 ERLEC1Q96DZ1 483 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 ZFRQ96KR1 1074 aaKnown RBP10.54□□□□□ -0.72
RFFL-208ENST00000581039 XPO6Q96QU8 1125 aaKnown RBP10.54□□□□□ -0.72
RFFL-208ENST00000581039 B3GNT5Q9BYG0 378 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 ZDHHC5Q9C0B5 715 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 DPEP3Q9H4B8 488 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 KIAA1586Q9HCI6 787 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 DNAJC17Q9NVM6 304 aaKnown RBP10.54□□□□□ -0.72
RFFL-208ENST00000581039 PPP4R2Q9NY27 417 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 HCN2Q9UL51 889 aa10.54□□□□□ -0.72
RFFL-208ENST00000581039 FRMD3A2A2Y4 597 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 CLDN5O00501 218 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 GJB3O75712 270 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 DLATP10515 647 aaKnown RBP10.53□□□□□ -0.72
RFFL-208ENST00000581039 IRF1P10914 325 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 MAOBP27338 520 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 TUBP50607 506 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 RABEP1Q15276 862 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 SNX30Q5VWJ9 437 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 EGFLAMQ63HQ2 1017 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 CCDC73Q6ZRK6 1079 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 RDH13Q8NBN7 331 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 B3GALNT2Q8NCR0 500 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 SCAMP5Q8TAC9 235 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 SETD7Q8WTS6 366 aaKnown RBP10.53□□□□□ -0.72
RFFL-208ENST00000581039 HNRNPLLQ8WVV9 542 aaKnown RBP10.53□□□□□ -0.72
RFFL-208ENST00000581039 KCNK16Q96T55 309 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 ACOX2Q99424 681 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 GABRG3Q99928 467 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 DUSP9Q99956 384 aaKnown RBP10.53□□□□□ -0.72
RFFL-208ENST00000581039 MED10Q9BTT4 135 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 FGFBP2Q9BYJ0 223 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 PANK2Q9BZ23 570 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 CCSER2Q9H7U1 834 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 TMEM30AQ9NV96 361 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 HSPBP1Q9NZL4 362 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 WDR35Q9P2L0 1181 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 NME7Q9Y5B8 376 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 ATP8B3O60423 1300 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 MYO18AQ92614 2054 aaKnown RBP10.53□□□□□ -0.72
RFFL-208ENST00000581039 MYOFQ9NZM1 2061 aa10.53□□□□□ -0.72
RFFL-208ENST00000581039 HELZP42694 1942 aaKnown RBP10.52□□□□□ -0.72
RFFL-208ENST00000581039 TNRC6BQ9UPQ9 1833 aaKnown RBP10.52□□□□□ -0.73
RFFL-208ENST00000581039 EIF4E1BA6NMX2 242 aaKnown RBP10.52□□□□□ -0.73
RFFL-208ENST00000581039 NEDD8-MDP1E9PL57 170 aa10.52□□□□□ -0.73
RFFL-208ENST00000581039 CD6P30203 668 aa10.52□□□□□ -0.73
RFFL-208ENST00000581039 STAT6P42226 847 aa10.52□□□□□ -0.73
RFFL-208ENST00000581039 GRIK2Q13002 908 aa10.52□□□□□ -0.73
RFFL-208ENST00000581039 TRPC3Q13507 836 aa10.52□□□□□ -0.73
RFFL-208ENST00000581039 KIAA1324Q6UXG2 1013 aaKnown RBP10.52□□□□□ -0.73
RFFL-208ENST00000581039 TPGS1Q6ZTW0 290 aa10.52□□□□□ -0.73
RFFL-208ENST00000581039 TOGARAM2Q6ZUX3 1019 aa10.52□□□□□ -0.73
RFFL-208ENST00000581039 HTR3DQ70Z44 454 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms