RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 PCDH9Q9HC56 1237 aa4.84□□□□□ -1.63
NUP85-213ENST00000579838 SAYSD1Q9NPB0 183 aa4.84□□□□□ -1.63
NUP85-213ENST00000579838 NGRNQ9NPE2 291 aaKnown RBP4.84□□□□□ -1.63
NUP85-213ENST00000579838 UBN1Q9NPG3 1134 aa4.84□□□□□ -1.63
NUP85-213ENST00000579838 ANLNQ9NQW6 1124 aa4.84□□□□□ -1.63
NUP85-213ENST00000579838 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.84□□□□□ -1.63
NUP85-213ENST00000579838 FAM105AQ9NUU6 356 aa4.84□□□□□ -1.63
NUP85-213ENST00000579838 ETNK2Q9NVF9 386 aa4.84□□□□□ -1.63
NUP85-213ENST00000579838 ASNSD1Q9NWL6 643 aa4.84□□□□□ -1.63
NUP85-213ENST00000579838 RNF186Q9NXI6 227 aa4.84□□□□□ -1.63
NUP85-213ENST00000579838 RSPH14Q9UHP6 348 aa4.84□□□□□ -1.63
NUP85-213ENST00000579838 KIAA1257Q9ULG3 409 aa4.84□□□□□ -1.63
NUP85-213ENST00000579838 TPX2Q9ULW0 747 aaKnown RBP4.84□□□□□ -1.63
NUP85-213ENST00000579838 ZNF148Q9UQR1 794 aa4.84□□□□□ -1.63
NUP85-213ENST00000579838 TIMM13Q9Y5L4 95 aaPredicted RBP4.84□□□□□ -1.63
NUP85-213ENST00000579838 USP3Q9Y6I4 520 aa4.84□□□□□ -1.63
NUP85-213ENST00000579838 UTRNP46939 3433 aa4.84□□□□□ -1.63
NUP85-213ENST00000579838 PTPRSQ13332 1948 aa4.84□□□□□ -1.64
NUP85-213ENST00000579838 GREB1Q4ZG55 1949 aa4.84□□□□□ -1.64
NUP85-213ENST00000579838 MYBPHLA2RUH7 354 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 C5orf60A6NFR6 353 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 CASTOR2A6NHX0 329 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 HHLA1C9JL84 531 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 APOC4-APOC2K7ER74 178 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 SGK1O00141 431 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 CYB561D2O14569 222 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 GABRDO14764 452 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 RASGRF2O14827 1237 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 XPO1O14980 1071 aaKnown RBP4.83□□□□□ -1.64
NUP85-213ENST00000579838 RGS16O15492 202 aaPredicted RBP4.83□□□□□ -1.64
NUP85-213ENST00000579838 CA12O43570 354 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 DAB1O75553 588 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 PIAS1O75925 651 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 TTC4O95801 387 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 AGTP01019 485 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 APOC2P02655 101 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 C1QAP02745 245 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 ITGB1P05556 798 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 FYNP06241 537 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 ASGR1P07306 291 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 KRT7P08729 469 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 GHRP10912 638 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 VAV1P15498 845 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 PTPN1P18031 435 aaKnown RBP4.83□□□□□ -1.64
NUP85-213ENST00000579838 IBSPP21815 317 aaPredicted RBP4.83□□□□□ -1.64
NUP85-213ENST00000579838 AMPD1P23109 780 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 RBL1P28749 1068 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 CD52P31358 61 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 L1CAMP32004 1257 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 PCK1P35558 622 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 GNL1P36915 607 aaPredicted RBP4.83□□□□□ -1.64
NUP85-213ENST00000579838 PTPN9P43378 593 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 BRCC3P46736 316 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 SULT1E1P49888 294 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 CLCNKBP51801 687 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 EIF3BP55884 814 aaKnown RBP4.83□□□□□ -1.64
NUP85-213ENST00000579838 NKX3-2P78367 333 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 ADIGQ0VDE8 80 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 SF3A3Q12874 501 aaKnown RBP eCLIP4.83□□□□□ -1.64
NUP85-213ENST00000579838 KCNJ11Q14654 390 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 LPIN1Q14693 890 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 STILQ15468 1287 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 PKN2Q16513 984 aaKnown RBP4.83□□□□□ -1.64
NUP85-213ENST00000579838 HADHQ16836 314 aaKnown RBP4.83□□□□□ -1.64
NUP85-213ENST00000579838 TCTN1Q2MV58 587 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 PAN2Q504Q3 1202 aaKnown RBP4.83□□□□□ -1.64
NUP85-213ENST00000579838 ANKRD20A8PQ5CZ79 823 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 FAM47CQ5HY64 1035 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 MDH1BQ5I0G3 518 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 GNASQ5JWF2 1037 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 ERMARDQ5T6L9 678 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 SYPL2Q5VXT5 272 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 NCBP2-AS2Q69YL0 99 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 SLC9A4Q6AI14 798 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 MFSD5Q6N075 450 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 CGB2Q6NT52 195 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 SCYL2Q6P3W7 929 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 TRAF7Q6Q0C0 670 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 LEKR1Q6ZMV7 388 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 CLEC20AQ6ZU45 233 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 SLC26A9Q7LBE3 791 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 BNIPLQ7Z465 357 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 MRPL10Q7Z7H8 261 aaKnown RBP4.83□□□□□ -1.64
NUP85-213ENST00000579838 SRLQ86TD4 932 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 PIGZQ86VD9 579 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 ZC3H18Q86VM9 953 aaKnown RBP4.83□□□□□ -1.64
NUP85-213ENST00000579838 HOOK3Q86VS8 718 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 RELL1Q8IUW5 271 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 LRRC34Q8IZ02 419 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 DEFB106AQ8N104 65 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 NME8Q8N427 588 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 TOP6BLQ8N6T0 577 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 FAM71DQ8N9W8 422 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 ANKRD52Q8NB46 1076 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 KCTD6Q8NC69 237 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 B3GALNT2Q8NCR0 500 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 APPL2Q8NEU8 664 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 BCAS4Q8TDM0 211 aa4.83□□□□□ -1.64
NUP85-213ENST00000579838 CENPIQ92674 756 aaPredicted RBP4.83□□□□□ -1.64
NUP85-213ENST00000579838 FAF2Q96CS3 445 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms