RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 RNF225M0QZC1 329 aaPredicted RBP18.41■□□□□ 0.54
ITGB4-205ENST00000579211 XPO1O14980 1071 aaKnown RBP18.41■□□□□ 0.54
ITGB4-205ENST00000579211 MED7O43513 233 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 ZDHHC11BP0C7U3 371 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 IRF1P10914 325 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 RARGP13631 454 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 ARSAP15289 507 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 TCF3P15923 654 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 CDK11BP21127 795 aaKnown RBP18.41■□□□□ 0.54
ITGB4-205ENST00000579211 BRD2P25440 801 aaKnown RBP18.41■□□□□ 0.54
ITGB4-205ENST00000579211 CTHP32929 405 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 MAGEA9P43362 315 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 TKTL1P51854 596 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 LRRC32Q14392 662 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 PON2Q15165 354 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 TCP11X2Q5H9J9 407 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 CAVIN1Q6NZI2 390 aaKnown RBP18.41■□□□□ 0.54
ITGB4-205ENST00000579211 LCLAT1Q6UWP7 414 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 TTC30AQ86WT1 665 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 SIX6OS1Q8N1H7 587 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 ARHGAP18Q8N392 663 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 KREMEN1Q96MU8 473 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 NAT10Q9H0A0 1025 aaKnown RBP18.41■□□□□ 0.54
ITGB4-205ENST00000579211 LMAN1LQ9HAT1 526 aa18.41■□□□□ 0.54
ITGB4-205ENST00000579211 O00370 1275 aa18.4■□□□□ 0.54
ITGB4-205ENST00000579211 NFATC1O95644 943 aa18.4■□□□□ 0.54
ITGB4-205ENST00000579211 OLFM2O95897 454 aa18.4■□□□□ 0.54
ITGB4-205ENST00000579211 SETSIPP0DME0 302 aa18.4■□□□□ 0.54
ITGB4-205ENST00000579211 PON1P27169 355 aa18.4■□□□□ 0.54
ITGB4-205ENST00000579211 CNGA2Q16280 664 aa18.4■□□□□ 0.54
ITGB4-205ENST00000579211 C10orf120Q5SQS8 335 aa18.4■□□□□ 0.54
ITGB4-205ENST00000579211 GJB7Q6PEY0 223 aa18.4■□□□□ 0.54
ITGB4-205ENST00000579211 RSRC2Q7L4I2 434 aaKnown RBP18.4■□□□□ 0.54
ITGB4-205ENST00000579211 CCDC186Q7Z3E2 898 aa18.4■□□□□ 0.54
ITGB4-205ENST00000579211 RIN3Q8TB24 985 aa18.4■□□□□ 0.54
ITGB4-205ENST00000579211 CDK5RAP1Q96SZ6 601 aaKnown RBP18.4■□□□□ 0.54
ITGB4-205ENST00000579211 LINC00597Q9H2U6 94 aa18.4■□□□□ 0.54
ITGB4-205ENST00000579211 ECT2Q9H8V3 914 aa18.4■□□□□ 0.54
ITGB4-205ENST00000579211 HPS4Q9NQG7 708 aa18.4■□□□□ 0.54
ITGB4-205ENST00000579211 THAP12O43422 761 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 LETM1O95202 739 aaPredicted RBP18.39■□□□□ 0.53
ITGB4-205ENST00000579211 ZBED1O96006 694 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 LCP1P13796 627 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 PTMSP20962 102 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 TCF15Q12870 199 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 ANGPT1Q15389 498 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 EML3Q32P44 896 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 BTBD8Q5XKL5 378 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 C11orf57Q6ZUT1 292 aaPredicted RBP18.39■□□□□ 0.53
ITGB4-205ENST00000579211 TFAP2BQ92481 460 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 VPS16Q9H269 839 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 NMUR1Q9HB89 426 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 FANCLQ9NW38 375 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 TAB2Q9NYJ8 693 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 TMEM63CQ9P1W3 806 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 TBC1D14Q9P2M4 693 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 DNMT3LQ9UJW3 386 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 LSM7Q9UK45 103 aaKnown RBP18.39■□□□□ 0.53
ITGB4-205ENST00000579211 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.39■□□□□ 0.53
ITGB4-205ENST00000579211 USP3Q9Y6I4 520 aa18.39■□□□□ 0.53
ITGB4-205ENST00000579211 E2F8A0AVK6 867 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 TULP2O00295 520 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 SCAMP3O14828 347 aaKnown RBP18.38■□□□□ 0.53
ITGB4-205ENST00000579211 LAMTOR5O43504 91 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 TBX18O95935 607 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 CALCAP01258 141 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 GNA15P30679 374 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 RPS9P46781 194 aaKnown RBP18.38■□□□□ 0.53
ITGB4-205ENST00000579211 PLA2G4AP47712 749 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 PGFP49763 221 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 RGS7P49802 495 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 YWHAGP61981 247 aaKnown RBP eCLIP18.38■□□□□ 0.53
ITGB4-205ENST00000579211 ZXDBP98169 803 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 MYL5Q02045 173 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 TYRO3Q06418 890 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 ADIGQ0VDE8 80 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 GRSF1Q12849 480 aaKnown RBP eCLIP18.38■□□□□ 0.53
ITGB4-205ENST00000579211 RAB41Q5JT25 222 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 DGKKQ5KSL6 1271 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 FKBP15Q5T1M5 1219 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 C1orf210Q8IVY1 113 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 SECISBP2LQ93073 1101 aaKnown RBP18.38■□□□□ 0.53
ITGB4-205ENST00000579211 ULBP1Q9BZM6 244 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 CYLDQ9NQC7 956 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 DLGAP2Q9P1A6 1054 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 RASAL2Q9UJF2 1139 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 DNAJC12Q9UKB3 198 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 NUDT5Q9UKK9 219 aa18.38■□□□□ 0.53
ITGB4-205ENST00000579211 PIK3R2O00459 728 aa18.37■□□□□ 0.53
ITGB4-205ENST00000579211 GJA4P35212 333 aa18.37■□□□□ 0.53
ITGB4-205ENST00000579211 PLA2G5P39877 138 aa18.37■□□□□ 0.53
ITGB4-205ENST00000579211 ZNF132P52740 706 aa18.37■□□□□ 0.53
ITGB4-205ENST00000579211 APBA1Q02410 837 aa18.37■□□□□ 0.53
ITGB4-205ENST00000579211 NHLH1Q02575 133 aa18.37■□□□□ 0.53
ITGB4-205ENST00000579211 RAPGEF1Q13905 1077 aa18.37■□□□□ 0.53
ITGB4-205ENST00000579211 MIIPQ5JXC2 388 aa18.37■□□□□ 0.53
ITGB4-205ENST00000579211 TXNDC11Q6PKC3 985 aa18.37■□□□□ 0.53
ITGB4-205ENST00000579211 MIB1Q86YT6 1006 aa18.37■□□□□ 0.53
ITGB4-205ENST00000579211 KIAA1958Q8N8K9 716 aa18.37■□□□□ 0.53
ITGB4-205ENST00000579211 KCTD13Q8WZ19 329 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms