RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 PAPSS2O95340 614 aaPredicted RBP15.64■□□□□ 0.09
SS18-212ENST00000579061 DRD1P21728 446 aa15.64■□□□□ 0.09
SS18-212ENST00000579061 CSTF1Q05048 431 aaKnown RBP15.64■□□□□ 0.09
SS18-212ENST00000579061 FBXO43Q4G163 708 aa15.64■□□□□ 0.09
SS18-212ENST00000579061 CT47A1Q5JQC4 288 aaPredicted RBP15.64■□□□□ 0.09
SS18-212ENST00000579061 RAB41Q5JT25 222 aa15.64■□□□□ 0.09
SS18-212ENST00000579061 RIF1Q5UIP0 2472 aaKnown RBP15.64■□□□□ 0.09
SS18-212ENST00000579061 TADA2BQ86TJ2 420 aa15.64■□□□□ 0.09
SS18-212ENST00000579061 TTC30AQ86WT1 665 aa15.64■□□□□ 0.09
SS18-212ENST00000579061 ADGRG2Q8IZP9 1017 aa15.64■□□□□ 0.09
SS18-212ENST00000579061 TTC16Q8NEE8 873 aa15.64■□□□□ 0.09
SS18-212ENST00000579061 JAKMIP2Q96AA8 810 aa15.64■□□□□ 0.09
SS18-212ENST00000579061 CNOT6LQ96LI5 555 aaKnown RBP15.64■□□□□ 0.09
SS18-212ENST00000579061 IPO9Q96P70 1041 aaKnown RBP15.64■□□□□ 0.09
SS18-212ENST00000579061 P2RY13Q9BPV8 354 aa15.64■□□□□ 0.09
SS18-212ENST00000579061 RBM12Q9NTZ6 932 aaKnown RBP15.64■□□□□ 0.09
SS18-212ENST00000579061 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.64■□□□□ 0.09
SS18-212ENST00000579061 HESX1Q9UBX0 185 aa15.64■□□□□ 0.09
SS18-212ENST00000579061 TSPAN16Q9UKR8 245 aa15.64■□□□□ 0.09
SS18-212ENST00000579061 FAM186AA6NE01 2351 aa15.64■□□□□ 0.09
SS18-212ENST00000579061 PRR23AA6NEV1 266 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 XPO1O14980 1071 aaKnown RBP15.63■□□□□ 0.09
SS18-212ENST00000579061 CYP26A1O43174 497 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 GFRA3O60609 400 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 CD19P15391 556 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 ERCC5P28715 1186 aaPredicted RBP15.63■□□□□ 0.09
SS18-212ENST00000579061 ATP5C1P36542 298 aaKnown RBP15.63■□□□□ 0.09
SS18-212ENST00000579061 CXCL12P48061 93 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 PGFP49763 221 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 GALK1P51570 392 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 BST2Q10589 180 aaKnown RBP15.63■□□□□ 0.09
SS18-212ENST00000579061 GAS6Q14393 721 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 STILQ15468 1287 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 SMYD5Q6GMV2 418 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 FSTL4Q6MZW2 842 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 TMEM270Q6UE05 265 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 PIGZQ86VD9 579 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 IRF2BP1Q8IU81 584 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 ZBTB44Q8NCP5 570 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 CD101Q93033 1021 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 FAM81BQ96LP2 452 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 CDK5RAP1Q96SZ6 601 aaKnown RBP15.63■□□□□ 0.09
SS18-212ENST00000579061 NACA2Q9H009 215 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 THAP9Q9H5L6 903 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 ZSCAN32Q9NX65 697 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 CLIC5Q9NZA1 410 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 SH3BP1Q9Y3L3 701 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 PCDHB4Q9Y5E5 795 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 PCDHGA2Q9Y5H1 932 aa15.63■□□□□ 0.09
SS18-212ENST00000579061 USP34Q70CQ2 3546 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 KIAA1549LQ6ZVL6 1849 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 A0A1W2PQH9 124 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 GTPBP10A4D1E9 387 aaKnown RBP15.62■□□□□ 0.09
SS18-212ENST00000579061 GOLGA6L22H0YM25 854 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 O00370 1275 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 SETSIPP0DME0 302 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 RALAP11233 206 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 TDGF1P13385 188 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 RARGP13631 454 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 PRKCSHP14314 528 aaPredicted RBP15.62■□□□□ 0.09
SS18-212ENST00000579061 EIF2DP41214 584 aaKnown RBP15.62■□□□□ 0.09
SS18-212ENST00000579061 NRLP54845 237 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 PDE4CQ08493 712 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 GOLGA8FQ08AF8 430 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 GOLGA8DPQ0D2H9 430 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 TPD52L1Q16890 204 aaPredicted RBP15.62■□□□□ 0.09
SS18-212ENST00000579061 GOLGA7BQ2TAP0 167 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 PKDCCQ504Y2 493 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 LCLAT1Q6UWP7 414 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 FAM114A1Q8IWE2 563 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 ARHGAP18Q8N392 663 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 CCDC26Q8TAB7 109 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 KAT5Q92993 513 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 KLF16Q9BXK1 252 aaPredicted RBP15.62■□□□□ 0.09
SS18-212ENST00000579061 INTS2Q9H0H0 1204 aaKnown RBP15.62■□□□□ 0.09
SS18-212ENST00000579061 NMUR1Q9HB89 426 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 OSER1Q9NX31 292 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 DNMT3LQ9UJW3 386 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 NAGPAQ9UK23 515 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 CNTN6Q9UQ52 1028 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 MYO15AQ9UKN7 3530 aa15.62■□□□□ 0.09
SS18-212ENST00000579061 PTPRZ1P23471 2315 aaPredicted RBP15.62■□□□□ 0.09
SS18-212ENST00000579061 LILRB5O75023 590 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 ATG13O75143 517 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 ADH1CP00326 375 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 CYP17A1P05093 508 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 PLA2G4AP47712 749 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 ZNF132P52740 706 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 SATB1Q01826 763 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 DHCR24Q15392 516 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 CNGA2Q16280 664 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 GAB4Q2WGN9 574 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 DPCR1Q3MIW9 517 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 PM20D1Q6GTS8 502 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 Q6ZS52 159 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 HTR3DQ70Z44 454 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 RRAGAQ7L523 313 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 ENOSF1Q7L5Y1 443 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 ASCL5Q7RTU5 278 aa15.61■□□□□ 0.09
SS18-212ENST00000579061 SCD5Q86SK9 330 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms