RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 OLFM2O95897 454 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 CLTAP09496 248 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 CTSKP43235 329 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 SLC7A9P82251 487 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 STK3Q13188 491 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 TOB2Q14106 344 aaPredicted RBP11.85□□□□□ -0.51
GGA3-206ENST00000578773 PDIA5Q14554 519 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 METTL23Q86XA0 190 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 BBS7Q8IWZ6 715 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 DHX40Q8IX18 779 aaKnown RBP11.85□□□□□ -0.51
GGA3-206ENST00000578773 DCP1BQ8IZD4 617 aaKnown RBP11.85□□□□□ -0.51
GGA3-206ENST00000578773 THEM5Q8N1Q8 247 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 EID2Q8N6I1 236 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 CADM4Q8NFZ8 388 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 KCNE4Q8WWG9 221 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 RUSC1Q9BVN2 902 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 PLEKHA5Q9HAU0 1116 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 ITM2CQ9NQX7 267 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 DEC1Q9P2X7 70 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 MAN2B2Q9Y2E5 1009 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 STARD13Q9Y3M8 1113 aa11.85□□□□□ -0.51
GGA3-206ENST00000578773 NYNRINQ9P2P1 1898 aaKnown RBP11.85□□□□□ -0.51
GGA3-206ENST00000578773 CLEC18AA5D8T8 446 aa11.84□□□□□ -0.51
GGA3-206ENST00000578773 HOXC11O43248 304 aaPredicted RBP11.84□□□□□ -0.51
GGA3-206ENST00000578773 SUV39H1O43463 412 aa11.84□□□□□ -0.51
GGA3-206ENST00000578773 NEMFO60524 1076 aa11.84□□□□□ -0.51
GGA3-206ENST00000578773 ATP2C2O75185 946 aa11.84□□□□□ -0.51
GGA3-206ENST00000578773 ITGB6P18564 788 aa11.84□□□□□ -0.51
GGA3-206ENST00000578773 MATR3P43243 847 aaKnown RBP eCLIP11.84□□□□□ -0.51
GGA3-206ENST00000578773 AFF3P51826 1226 aaKnown RBP11.84□□□□□ -0.51
GGA3-206ENST00000578773 RPL10AP62906 217 aaKnown RBP11.84□□□□□ -0.51
GGA3-206ENST00000578773 GAD2Q05329 585 aa11.84□□□□□ -0.51
GGA3-206ENST00000578773 ANO4Q32M45 955 aa11.84□□□□□ -0.51
GGA3-206ENST00000578773 CLEC18BQ6UXF7 455 aa11.84□□□□□ -0.51
GGA3-206ENST00000578773 ATG14Q6ZNE5 492 aa11.84□□□□□ -0.51
GGA3-206ENST00000578773 DCBLD1Q8N8Z6 715 aa11.84□□□□□ -0.51
GGA3-206ENST00000578773 CLEC18CQ8NCF0 446 aa11.84□□□□□ -0.51
GGA3-206ENST00000578773 ORAI3Q9BRQ5 295 aa11.84□□□□□ -0.51
GGA3-206ENST00000578773 DNAJC17Q9NVM6 304 aaKnown RBP11.84□□□□□ -0.51
GGA3-206ENST00000578773 SSUH2Q9Y2M2 353 aa11.84□□□□□ -0.51
GGA3-206ENST00000578773 A0A1B0GTQ1 180 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 BLACEA4D250 179 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 ZNF840PA6NDX5 716 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 K7ENP7 123 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 PAPSS1O43252 624 aaPredicted RBP11.83□□□□□ -0.52
GGA3-206ENST00000578773 ABL1P00519 1130 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 OAS1P00973 400 aaKnown RBP11.83□□□□□ -0.52
GGA3-206ENST00000578773 POU3F2P20265 443 aaPredicted RBP11.83□□□□□ -0.52
GGA3-206ENST00000578773 RPS6KB1P23443 525 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 ACSL1P33121 698 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 UCNP55089 124 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 TLE1Q04724 770 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 SMARCB1Q12824 385 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 INTS6LQ5JSJ4 861 aaKnown RBP11.83□□□□□ -0.52
GGA3-206ENST00000578773 GRAMD4Q6IC98 578 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 INO80CQ6PI98 192 aaPredicted RBP11.83□□□□□ -0.52
GGA3-206ENST00000578773 PDCL2Q8N4E4 241 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 FSIP1Q8NA03 581 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 KCNV2Q8TDN2 545 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 LEO1Q8WVC0 666 aaPredicted RBP11.83□□□□□ -0.52
GGA3-206ENST00000578773 DRC1Q96MC2 740 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 PSMG3-AS1Q96PY0 264 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 NAP1L4Q99733 375 aaKnown RBP11.83□□□□□ -0.52
GGA3-206ENST00000578773 STARD5Q9NSY2 213 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 LRWD1Q9UFC0 647 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 DSEQ9UL01 958 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 L1RE1Q9UN81 338 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 CLCA2Q9UQC9 943 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 SNX14Q9Y5W7 946 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 STON1Q9Y6Q2 735 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 CSMD1Q96PZ7 3565 aa11.83□□□□□ -0.52
GGA3-206ENST00000578773 A0A1W2PNU3 283 aaPredicted RBP11.82□□□□□ -0.52
GGA3-206ENST00000578773 PMS2P1A4D2B8 440 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 ENO4A6NNW6 628 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 SLC9A3R1O14745 358 aaPredicted RBP11.82□□□□□ -0.52
GGA3-206ENST00000578773 CLDN3O15551 220 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 AFPP02771 609 aaKnown RBP11.82□□□□□ -0.52
GGA3-206ENST00000578773 WNT1P04628 370 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 ADRB2P07550 413 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 MAPTP10636 758 aaKnown RBP11.82□□□□□ -0.52
GGA3-206ENST00000578773 IRF1P10914 325 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 MBL2P11226 248 aaPredicted RBP11.82□□□□□ -0.52
GGA3-206ENST00000578773 RPA1P27694 616 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 TAF6P49848 677 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 COPAP53621 1224 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 EVCP57679 992 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 GABREP78334 506 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 TSPY1Q01534 308 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 RAD51AP2Q09MP3 1159 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 TMEM161BQ8NDZ6 487 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 VCPIP1Q96JH7 1222 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 CAAP1Q9H8G2 361 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 RPF1Q9H9Y2 349 aaKnown RBP11.82□□□□□ -0.52
GGA3-206ENST00000578773 ASCL3Q9NQ33 180 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 SPHK2Q9NRA0 654 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 TMEM30AQ9NV96 361 aa11.82□□□□□ -0.52
GGA3-206ENST00000578773 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.82□□□□□ -0.52
GGA3-206ENST00000578773 LRRK1Q38SD2 2015 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 E9PMD0 336 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 ZBTB24O43167 697 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms