RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 PFKLP17858 780 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 MMP8P22894 467 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 DDX6P26196 483 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GABRR2P28476 465 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SCNN1AP37088 669 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 KRT83P78385 493 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 RBM10P98175 930 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GFPT1Q06210 699 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 TAF10Q12962 218 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ZNF268Q14587 947 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PUS10Q3MIT2 529 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PTPN20Q4JDL3 420 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 EFHC1Q5JVL4 640 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 PM20D1Q6GTS8 502 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 MMS22LQ6ZRQ5 1243 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 GRASPQ7Z6J2 395 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 MON1AQ86VX9 555 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 WDTC1Q8N5D0 677 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 C12orf76Q8N812 135 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CTNNBL1Q8WYA6 563 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CPXM1Q96SM3 734 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 EIF3CQ99613 913 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 SELENOOQ9BVL4 669 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ULBP1Q9BZM6 244 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ISCUQ9H1K1 167 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 MRPL47Q9HD33 250 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 ASNSD1Q9NWL6 643 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 IL37Q9NZH6 218 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 CLEC1BQ9P126 229 aa11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 MRPS23Q9Y3D9 190 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 EPN1Q9Y6I3 576 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-210ENST00000578733 DOCK8Q8NF50 2099 aa11.83□□□□□ -0.51
CDK5RAP3-210ENST00000578733 FAM92AA1XBS5 289 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 PIK3R2O00459 728 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 CAPN9O14815 690 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 HSF2BPO75031 334 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 NDUFA10O95299 355 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 ABL1P00519 1130 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 FTLP02792 175 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 GLI1P08151 1106 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 H2AFZP0C0S5 128 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 HMGA1P17096 107 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 KCNA5P22460 613 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 FSHRP23945 695 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 EPHA5P54756 1037 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 DAOAP59103 153 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 YWHAGP61981 247 aaKnown RBP eCLIP11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 GPC5P78333 572 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 SLC6A3Q01959 620 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 SMAD4Q13485 552 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 MTMR3Q13615 1198 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 ASTE1Q2TB18 679 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 FAM102AQ5T9C2 384 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 BTBD8Q5XKL5 378 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 DNAJC24Q6P3W2 148 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 SYCE2Q6PIF2 218 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 H2AFVQ71UI9 128 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 GPRIN1Q7Z2K8 1008 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 SCUBE3Q8IX30 993 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 MCOLN2Q8IZK6 566 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 SCAMP5Q8TAC9 235 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 RNF139Q8WU17 664 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 FAM149B1Q96BN6 582 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 ZNF707Q96C28 371 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 ZNF653Q96CK0 615 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 MSLNLQ96KJ4 702 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 NACA2Q9H009 215 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 ATXN3LQ9H3M9 355 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 ABCC13Q9NSE7 274 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 OLA1Q9NTK5 396 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 PARVAQ9NVD7 372 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 TMEM51Q9NW97 253 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 CLIC5Q9NZA1 410 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 DNMT3BQ9UBC3 853 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 CYTH4Q9UIA0 394 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 INTUQ9ULD6 942 aa11.83□□□□□ -0.52
CDK5RAP3-210ENST00000578733 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 SOWAHDA6NJG2 315 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 PI4K2BG5E9Z4 385 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 LCA5LO95447 670 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 LTFP02788 710 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 ERBB2P04626 1255 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 LTBRP36941 435 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 MAGEA1P43355 309 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 TUBP50607 506 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 GSCP56915 257 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 USP46P62068 366 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 HECTD3Q5T447 861 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 DCUN1D2Q6PH85 259 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 FAM183BPQ6ZVS7 135 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 MON1BQ7L1V2 547 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 RSRC2Q7L4I2 434 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 SLC26A9Q7LBE3 791 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 XYLT1Q86Y38 959 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 TMC8Q8IU68 726 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 TMEM139Q8IV31 216 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 SMRP1Q8NCR6 262 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 C3orf20Q8ND61 904 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 OLIG1Q8TAK6 271 aa11.82□□□□□ -0.52
CDK5RAP3-210ENST00000578733 APOL5Q9BWW9 433 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms