RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 CUEDC2Q9H467 287 aa4.73□□□□□ -1.65
PPP4R1-209ENST00000578329 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.73□□□□□ -1.651e-6■■■■■ 46.6
PPP4R1-209ENST00000578329 NXF1Q9UBU9 619 aaKnown RBP4.73□□□□□ -1.65
PPP4R1-209ENST00000578329 FBXO10Q9UK96 956 aa4.73□□□□□ -1.65
PPP4R1-209ENST00000578329 NUDT5Q9UKK9 219 aa4.73□□□□□ -1.65
PPP4R1-209ENST00000578329 MMP17Q9ULZ9 603 aa4.73□□□□□ -1.65
PPP4R1-209ENST00000578329 TRAF3IP3Q9Y228 551 aa4.73□□□□□ -1.65
PPP4R1-209ENST00000578329 CEP192Q8TEP8 1941 aa4.73□□□□□ -1.65
PPP4R1-209ENST00000578329 UBE4BO95155 1302 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 ANKRD11Q6UB99 2663 aaPredicted RBP4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 PLXNB3Q9ULL4 1909 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 CKAP5Q14008 2032 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 IGSF10Q6WRI0 2623 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 A8MXQ7 604 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 WASH3PC4AMC7 463 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 TAF4O00268 1085 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 CYP26A1O43174 497 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 HOXC11O43248 304 aaPredicted RBP4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 TULP3O75386 442 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 GJB3O75712 270 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 KAT7O95251 611 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 KCNK5O95279 499 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 KLF8O95600 359 aaPredicted RBP4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 APBB3O95704 486 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 HLA-DRAP01903 254 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 TNNC2P02585 160 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 NR3C1P04150 777 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 C7P10643 843 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 HOXB3P14651 431 aaPredicted RBP4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 TNNI1P19237 187 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 BMP6P22004 513 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 CMA1P23946 247 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 ATICP31939 592 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 GRIK1P39086 918 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 KIF11P52732 1056 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 SHC2P98077 582 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 KDSRQ06136 332 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 GRSF1Q12849 480 aaKnown RBP eCLIP4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 ENPP2Q13822 863 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 EGFLAMQ63HQ2 1017 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 ANO7Q6IWH7 933 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 C4orf50Q6ZRC1 276 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 HTR3DQ70Z44 454 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 CACNA2D4Q7Z3S7 1137 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 PIP4P1Q86T03 277 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 TTC30AQ86WT1 665 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 SLC41A1Q8IVJ1 513 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 NUP93Q8N1F7 819 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 CPA6Q8N4T0 437 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 GPR161Q8N6U8 529 aaKnown RBP4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 KIAA1958Q8N8K9 716 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 NAT16Q8N8M0 369 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 IQUBQ8NA54 791 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 TXNDC5Q8NBS9 432 aaKnown RBP4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 SPRYD3Q8NCJ5 442 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 ENGASEQ8NFI3 743 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 C1orf216Q8TAB5 229 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 TMC2Q8TDI7 906 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 ERCC4Q92889 916 aaPredicted RBP4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 TATDN2Q93075 761 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 ATP2A3Q93084 1043 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 ERLEC1Q96DZ1 483 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 CNOT6LQ96LI5 555 aaKnown RBP4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 MED15Q96RN5 788 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 MMS19Q96T76 1030 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 GDPD2Q9HCC8 539 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 KIAA1586Q9HCI6 787 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 CYLDQ9NQC7 956 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 KRT82Q9NSB4 513 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 FAM49BQ9NUQ9 324 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 THG1LQ9NWX6 298 aaKnown RBP4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 TRPM5Q9NZQ8 1165 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 UXTQ9UBK9 157 aaPredicted RBP4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 ZMYM5Q9UJ78 669 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 GMEB2Q9UKD1 530 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 CDV3Q9UKY7 258 aaKnown RBP4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 MAPK8IP1Q9UQF2 711 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 USP3Q9Y6I4 520 aa4.72□□□□□ -1.65
PPP4R1-209ENST00000578329 APC2O95996 2303 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 IGHV1OR15-9A0A0B4J2B8 117 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 A0A1W2PQH9 124 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 E2F8A0AVK6 867 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 C4orf47A7E2U8 309 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 C1QTNF9BB2RNN3 333 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 KCNJ18B7U540 433 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 RNF225M0QZC1 329 aaPredicted RBP4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 PDXKO00764 312 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 TRIM66O15016 1216 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 CACNG3O60359 315 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 EXOC3O60645 756 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 CILPO75339 1184 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 AP1G2O75843 785 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 STC2O76061 302 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 RHOBTB3O94955 611 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 NFATC1O95644 943 aa4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 PENKP01210 267 aaPredicted RBP4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 RPN1P04843 607 aaKnown RBP4.71□□□□□ -1.66
PPP4R1-209ENST00000578329 C1QTNF9P0C862 333 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms