RNA–Protein interactions for RNA: ENST00000577667.1

PPP4R1-205, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-205	ENST00000577667	TMEM171	Q8WVE6	324 aa		4.18	□□□□□ -1.74
PPP4R1-205	ENST00000577667	STAG1	Q8WVM7	1258 aa		4.18	□□□□□ -1.74
PPP4R1-205	ENST00000577667	RAPGEF4	Q8WZA2	1011 aa		4.18	□□□□□ -1.74
PPP4R1-205	ENST00000577667	CAMKK2	Q96RR4	588 aa		4.18	□□□□□ -1.74
PPP4R1-205	ENST00000577667	DDX56	Q9NY93	547 aa	Known RBP	4.18	□□□□□ -1.74
PPP4R1-205	ENST00000577667	IQGAP1	P46940	1657 aa		4.18	□□□□□ -1.74
PPP4R1-205	ENST00000577667	CLIP1	P30622	1438 aa		4.18	□□□□□ -1.74
PPP4R1-205	ENST00000577667	FMN1	Q68DA7	1419 aa		4.18	□□□□□ -1.74
PPP4R1-205	ENST00000577667	INO80	Q9ULG1	1556 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-205	ENST00000577667	SPAG9	O60271	1321 aa	Known RBP	4.18	□□□□□ -1.74
PPP4R1-205	ENST00000577667	MED14	O60244	1454 aa		4.18	□□□□□ -1.74
PPP4R1-205	ENST00000577667	DEPDC5	O75140	1603 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	CFAP65	Q6ZU64	1925 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	ADGB	Q8N7X0	1667 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	TMEM233	B4DJY2	109 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	PROB1	E7EW31	1015 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	AP4M1	O00189	453 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	PHGDH	O43175	533 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	CHRM5	P08912	532 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	PDGFRB	P09619	1106 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	MMP13	P45452	471 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	RENBP	P51606	427 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	RAB32	Q13637	225 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	MLC1	Q15049	377 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	ANO6	Q4KMQ2	910 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	RNASE12	Q5GAN4	147 aa	Known RBP	4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	CERCAM	Q5T4B2	595 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	GGT6	Q6P531	493 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	ZBTB34	Q8NCN2	500 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	ZBTB9	Q96C00	473 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	PRR25	Q96S07	402 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	MMS19	Q96T76	1030 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	C17orf80	Q9BSJ5	609 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	DPH1	Q9BZG8	443 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	GBA2	Q9HCG7	927 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	ZSCAN32	Q9NX65	697 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	TUBA8	Q9NY65	449 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	KLHL13	Q9P2N7	655 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	NPHP4	O75161	1426 aa	Predicted RBP	4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	SYNM	O15061	1565 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	WDR17	Q8IZU2	1322 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	A2M	P01023	1474 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	ARHGAP35	Q9NRY4	1499 aa		4.17	□□□□□ -1.74
PPP4R1-205	ENST00000577667	ZC3H13	Q5T200	1668 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	TNR	Q92752	1358 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	CYP2D7	A0A087X1C5	515 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	PPEF2	O14830	753 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	TBC1D4	O60343	1298 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	BCAR3	O75815	825 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	MYB	P10242	640 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	CYP2A6	P11509	494 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	ALDH5A1	P51649	535 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	AGFG1	P52594	562 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	MAPK7	Q13164	816 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	DAZAP2	Q15038	168 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	COL23A1	Q86Y22	540 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	SPART	Q8N0X7	666 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	SIRT6	Q8N6T7	355 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	PPP2R3C	Q969Q6	453 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	RSPRY1	Q96DX4	576 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	B3GNT5	Q9BYG0	378 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	SPRTN	Q9H040	489 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	CDH19	Q9H159	772 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	VPS16	Q9H269	839 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	ANLN	Q9NQW6	1124 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	ELOVL5	Q9NYP7	299 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	TFCP2L1	Q9NZI6	479 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	AMFR	Q9UKV5	643 aa		4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	GPATCH8	Q9UKJ3	1502 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-205	ENST00000577667	EEA1	Q15075	1411 aa		4.15	□□□□□ -1.74
PPP4R1-205	ENST00000577667	PSMD9	O00233	223 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	MYCL	P12524	364 aa	Predicted RBP	4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	EN2	P19622	333 aa	Predicted RBP	4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	SLC7A1	P30825	629 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	RGS19	P49795	217 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	SUMO2	P61956	95 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	FAM187B	Q17R55	369 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	PTCHD3	Q3KNS1	767 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667		Q4G0T1	1027 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	DCAF12L1	Q5VU92	463 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	NPNT	Q6UXI9	565 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	OVCH2	Q7RTZ1	564 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	IL31RA	Q8NI17	732 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	MAML1	Q92585	1016 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	FYTTD1	Q96QD9	318 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	FAM118B	Q9BPY3	351 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	SMURF2	Q9HAU4	748 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	ATP6V0A4	Q9HBG4	840 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	ZIM2	Q9NZV7	527 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	PZP	P20742	1482 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	CEP350	Q5VT06	3117 aa		4.15	□□□□□ -1.75
PPP4R1-205	ENST00000577667	UGGT1	Q9NYU2	1555 aa		4.14	□□□□□ -1.75
PPP4R1-205	ENST00000577667	KIAA1107	Q9UPP5	1409 aa		4.14	□□□□□ -1.75
PPP4R1-205	ENST00000577667	ROBO1	Q9Y6N7	1651 aa		4.14	□□□□□ -1.75
PPP4R1-205	ENST00000577667	NLRP1	Q9C000	1473 aa		4.14	□□□□□ -1.75
PPP4R1-205	ENST00000577667	TCRBV5S1A1T	A0A578	114 aa		4.14	□□□□□ -1.75
PPP4R1-205	ENST00000577667		E5RJQ4	531 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms