RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 TPRP12270 2363 aaKnown RBP10.75□□□□□ -0.69
SS18-207ENST00000577636 A0A0A6YYK5 440 aaPredicted RBP10.74□□□□□ -0.69
SS18-207ENST00000577636 A0A0U1RQJ8 604 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 SMIM28A0A1B0GU29 152 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 ARHGEF37A1IGU5 675 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 ANKRD62A6NC57 917 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 RCCD1A6NED2 376 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 HEPACAM2A8MVW5 462 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 H7C4K7 107 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 TMEM189-UBE2V1I3L0A0 370 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 PODXLO00592 558 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 DYNC1I1O14576 645 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 RTN2O75298 545 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 MOCS3O95396 460 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 TMEM253P0C7T8 217 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 CHRNB1P11230 501 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 GZMAP12544 262 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 ATF2P15336 505 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 SOX9P48436 509 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 WNT7BP56706 349 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 MYL6P60660 151 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 RBP5P82980 135 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 CKAP4Q07065 602 aaKnown RBP10.74□□□□□ -0.69
SS18-207ENST00000577636 TWF1Q12792 350 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 GAS6Q14393 721 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 CSRP2Q16527 193 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 WHAMMP3Q1A5X7 153 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 AASDHQ4L235 1098 aaPredicted RBP10.74□□□□□ -0.69
SS18-207ENST00000577636 CTXN3Q4LDR2 81 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 JADE1Q6IE81 842 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 TRIM72Q6ZMU5 477 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 RHOT2Q8IXI1 618 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 ZNF687Q8N1G0 1237 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 CEP120Q8N960 986 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 BEST2Q8NFU1 509 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 SLC30A5Q8TAD4 765 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 ZSCAN18Q8TBC5 510 aaPredicted RBP10.74□□□□□ -0.69
SS18-207ENST00000577636 EPS8L1Q8TE68 723 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 SMARCD2Q92925 531 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 TRIM11Q96F44 468 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 KIF12Q96FN5 646 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 UROC1Q96N76 676 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 PPP1R10Q96QC0 940 aaKnown RBP10.74□□□□□ -0.69
SS18-207ENST00000577636 AVENQ9NQS1 362 aaPredicted RBP10.74□□□□□ -0.69
SS18-207ENST00000577636 CDC23Q9UJX2 597 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 NUB1Q9Y5A7 615 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 INSL5Q9Y5Q6 135 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.74□□□□□ -0.69
SS18-207ENST00000577636 SAR1BQ9Y6B6 198 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 NOTCH4Q99466 2003 aa10.74□□□□□ -0.69
SS18-207ENST00000577636 PATJQ8NI35 1801 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 SLC38A8A6NNN8 435 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 TMCO5BA8MYB1 307 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 BUB1O43683 1085 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 ABLIM3O94929 683 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 ITGB3P05106 788 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 NFICP08651 508 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 HOXC13P31276 330 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 GALCP54803 685 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 TNNC1P63316 161 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 SOX4Q06945 474 aaPredicted RBP10.73□□□□□ -0.69
SS18-207ENST00000577636 TEAD2Q15562 447 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 SLC10A6Q3KNW5 377 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 N4BP2L1Q5TBK1 243 aaPredicted RBP10.73□□□□□ -0.69
SS18-207ENST00000577636 TAF3Q5VWG9 929 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 SLC8B1Q6J4K2 584 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 TMEM270Q6UE05 265 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 SLC47A2Q86VL8 602 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 RBBP8NLQ8NC74 664 aaPredicted RBP10.73□□□□□ -0.69
SS18-207ENST00000577636 DEPDC1BQ8WUY9 529 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 UBE2Q2Q8WVN8 375 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 FAM124BQ9H5Z6 455 aaPredicted RBP10.73□□□□□ -0.69
SS18-207ENST00000577636 DPP3Q9NY33 737 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 NOCTQ9UK39 431 aaKnown RBP10.73□□□□□ -0.69
SS18-207ENST00000577636 ANGPTL2Q9UKU9 493 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 TFR2Q9UP52 801 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 CEP83Q9Y592 693 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 MRFAP1Q9Y605 127 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 DUSP10Q9Y6W6 482 aa10.73□□□□□ -0.69
SS18-207ENST00000577636 THAP12O43422 761 aa10.72□□□□□ -0.69
SS18-207ENST00000577636 MED7O43513 233 aa10.72□□□□□ -0.69
SS18-207ENST00000577636 LRP3O75074 770 aa10.72□□□□□ -0.69
SS18-207ENST00000577636 MOSPD3O75425 235 aa10.72□□□□□ -0.69
SS18-207ENST00000577636 ABL1P00519 1130 aa10.72□□□□□ -0.69
SS18-207ENST00000577636 CST3P01034 146 aaPredicted RBP10.72□□□□□ -0.69
SS18-207ENST00000577636 FTLP02792 175 aaPredicted RBP10.72□□□□□ -0.69
SS18-207ENST00000577636 MYBL1P10243 752 aa10.72□□□□□ -0.69
SS18-207ENST00000577636 CPB1P15086 417 aa10.72□□□□□ -0.69
SS18-207ENST00000577636 TCP1P17987 556 aaKnown RBP10.72□□□□□ -0.69
SS18-207ENST00000577636 ABCB4P21439 1286 aa10.72□□□□□ -0.69
SS18-207ENST00000577636 GNA15P30679 374 aa10.72□□□□□ -0.69
SS18-207ENST00000577636 NSFP46459 744 aaKnown RBP10.72□□□□□ -0.69
SS18-207ENST00000577636 LRRC32Q14392 662 aa10.72□□□□□ -0.69
SS18-207ENST00000577636 SF3A2Q15428 464 aaKnown RBP10.72□□□□□ -0.69
SS18-207ENST00000577636 WDR72Q3MJ13 1102 aa10.72□□□□□ -0.69
SS18-207ENST00000577636 CCDC181Q5TID7 509 aa10.72□□□□□ -0.69
SS18-207ENST00000577636 PAPD7Q5XG87 772 aaKnown RBP10.72□□□□□ -0.69
SS18-207ENST00000577636 SPOPLQ6IQ16 392 aa10.72□□□□□ -0.69
SS18-207ENST00000577636 MAMSTRQ6ZN01 415 aa10.72□□□□□ -0.69
SS18-207ENST00000577636 Q6ZS52 159 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms