RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 XRRA1Q6P2D8 792 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 CEP85Q6P2H3 762 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 CAND1Q86VP6 1230 aaKnown RBP2.96□□□□□ -1.94
COPS3-213ENST00000577210 RASGRP3Q8IV61 690 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 SFTPA1Q8IWL2 248 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 XAGE5Q8WWM1 108 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 CCT6BQ92526 530 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 GLG1Q92896 1179 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 EID2BQ96D98 161 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 HERPUD2Q9BSE4 406 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 C17orf80Q9BSJ5 609 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 DUSP26Q9BV47 211 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 CINPQ9BW66 212 aaPredicted RBP2.96□□□□□ -1.94
COPS3-213ENST00000577210 PCDHAC1Q9H158 963 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 SERTAD4Q9NUC0 356 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 MRPS18AQ9NVS2 196 aaKnown RBP2.96□□□□□ -1.94
COPS3-213ENST00000577210 ING1Q9UK53 422 aaPredicted RBP2.96□□□□□ -1.94
COPS3-213ENST00000577210 AMFRQ9UKV5 643 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 ZMYND8Q9ULU4 1186 aaPredicted RBP2.96□□□□□ -1.94
COPS3-213ENST00000577210 MRPS17Q9Y2R5 130 aaKnown RBP2.96□□□□□ -1.94
COPS3-213ENST00000577210 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.96□□□□□ -1.94
COPS3-213ENST00000577210 INSL6Q9Y581 213 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 PCDHGB2Q9Y5G2 931 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 HS3ST3A1Q9Y663 406 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 COL15A1P39059 1388 aa2.96□□□□□ -1.94
COPS3-213ENST00000577210 A0A087X1B8 175 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 FAM234BA2RU67 622 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 GRID2IPA4D2P6 1211 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 EFCAB8A8MWE9 144 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 SYT5O00445 386 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 USP12O75317 370 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 NTSR2O95665 410 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 CSTBP04080 98 aaKnown RBP2.95□□□□□ -1.94
COPS3-213ENST00000577210 FESP07332 822 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 ITGA2BP08514 1039 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 SRGAP2BP0DMP2 458 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 TMEM225BP0DP42 221 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 NR2F6P10588 404 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 NPPBP16860 134 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 ADRA1DP25100 572 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 GKP32189 559 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 CXCR5P32302 372 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 MPLP40238 635 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 CCT5P48643 541 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 MCM2P49736 904 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 RARRES1P49788 294 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 ITGA8P53708 1063 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 CACNA2D1P54289 1103 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 ELLP55199 621 aaPredicted RBP2.95□□□□□ -1.94
COPS3-213ENST00000577210 EEFSECP57772 596 aaKnown RBP2.95□□□□□ -1.94
COPS3-213ENST00000577210 EIF4A1P60842 406 aaKnown RBP2.95□□□□□ -1.94
COPS3-213ENST00000577210 KLF10Q13118 480 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 EIF2B5Q13144 721 aaKnown RBP2.95□□□□□ -1.94
COPS3-213ENST00000577210 ZIK1Q3SY52 487 aaPredicted RBP2.95□□□□□ -1.94
COPS3-213ENST00000577210 CCDC38Q502W7 563 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 C10orf62Q5T681 223 aaPredicted RBP2.95□□□□□ -1.94
COPS3-213ENST00000577210 RRAGBQ5VZM2 374 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 CRTC1Q6UUV9 634 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 KIAA0408Q6ZU52 694 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 PTCHD4Q6ZW05 846 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 SLC29A4Q7RTT9 530 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 CCDC28AQ8IWP9 274 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 FAM71BQ8TC56 605 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 TRAPPC12Q8WVT3 735 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 POF1BQ8WVV4 589 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 LARP4BQ92615 738 aaKnown RBP2.95□□□□□ -1.94
COPS3-213ENST00000577210 RFKQ969G6 155 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 PDLIM2Q96JY6 352 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 HAPLN3Q96S86 360 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 EIF3CQ99613 913 aaKnown RBP2.95□□□□□ -1.94
COPS3-213ENST00000577210 TIMP4Q99727 224 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 GDF15Q99988 308 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 CRB3Q9BUF7 120 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 MRIQ9BWK5 157 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 AGO4Q9HCK5 861 aaKnown RBP2.95□□□□□ -1.94
COPS3-213ENST00000577210 ALG13Q9NP73 1137 aaKnown RBP2.95□□□□□ -1.94
COPS3-213ENST00000577210 TMLHEQ9NVH6 421 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 HERC5Q9UII4 1024 aaKnown RBP2.95□□□□□ -1.94
COPS3-213ENST00000577210 ENTPD2Q9Y5L3 495 aa2.95□□□□□ -1.94
COPS3-213ENST00000577210 EPN1Q9Y6I3 576 aaPredicted RBP2.95□□□□□ -1.94
COPS3-213ENST00000577210 ZAR1LA6NP61 321 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 TTC34A8MYJ7 566 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 BTBD19C9JJ37 291 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 ADM5C9JUS6 153 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 UBE2Q2LH0YL09 131 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 EXOC5O00471 708 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 PROP1O75360 226 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 PMPCBO75439 489 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 JTBO76095 146 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 WDR47O94967 919 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 NDST3O95803 873 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 ITGA5P08648 1049 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 ELFN1P0C7U0 828 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 CREB1P16220 341 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 WT1P19544 449 aaPredicted RBP2.94□□□□□ -1.94
COPS3-213ENST00000577210 GPD1P21695 349 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 MATN1P21941 496 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 MST1P26927 711 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 ADORA2AP29274 412 aa2.94□□□□□ -1.94
COPS3-213ENST00000577210 SERPINB3P29508 390 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms