RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 F8VP50 259 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 CCDC188H7C350 402 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 LILRB3O75022 631 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 LRCH4O75427 683 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 BEST1O76090 585 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 F9P00740 461 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 TUBBP07437 444 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 CTSAP10619 480 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 HAPLN1P10915 354 aaPredicted RBP13.03□□□□□ -0.32
TSEN54-204ENST00000577197 CPB1P15086 417 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 FLT3P36888 993 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 ZNF135P52742 658 aaPredicted RBP13.03□□□□□ -0.32
TSEN54-204ENST00000577197 OGDHQ02218 1023 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 MTA1Q13330 715 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 BOLA3Q53S33 107 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 SEL1L2Q5TEA6 688 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 PDE12Q6L8Q7 609 aaKnown RBP13.03□□□□□ -0.32
TSEN54-204ENST00000577197 CC2D1AQ6P1N0 951 aaPredicted RBP13.03□□□□□ -0.32
TSEN54-204ENST00000577197 SPRED2Q7Z698 418 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 RCOR2Q8IZ40 523 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 VPS52Q8N1B4 723 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 NUP93Q8N1F7 819 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 JOSD2Q8TAC2 188 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 COG1Q8WTW3 980 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 POF1BQ8WVV4 589 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 RXFP2Q8WXD0 754 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 ARNTL2Q8WYA1 636 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 RIN2Q8WYP3 895 aaPredicted RBP13.03□□□□□ -0.32
TSEN54-204ENST00000577197 ALG3Q92685 438 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 TMEM209Q96SK2 561 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 TRIM7Q9C029 511 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 ZBP1Q9H171 429 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 GOLPH3Q9H4A6 298 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 ZNF576Q9H609 170 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 MRPL17Q9NRX2 175 aaKnown RBP13.03□□□□□ -0.32
TSEN54-204ENST00000577197 TMEM30AQ9NV96 361 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.03□□□□□ -0.32
TSEN54-204ENST00000577197 SCML2Q9UQR0 700 aa13.03□□□□□ -0.32
TSEN54-204ENST00000577197 MDM4O15151 490 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 NCK2O43639 380 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 TADA3O75528 432 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 ZRANB2O95218 330 aaKnown RBP eCLIP13.02□□□□□ -0.33
TSEN54-204ENST00000577197 LTFP02788 710 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 LCP1P13796 627 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 ATF2P15336 505 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 GRIK1P39086 918 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 NDUFV1P49821 464 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 SLC5A3P53794 718 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 ROR1Q01973 937 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 SLC25A11Q02978 314 aaKnown RBP13.02□□□□□ -0.33
TSEN54-204ENST00000577197 CCDC14Q49A88 953 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 LLGL2Q6P1M3 1020 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 MON1AQ86VX9 555 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 TCEAL8Q8IYN2 117 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 BTBD6Q96KE9 485 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 RUNDC3BQ96NL0 473 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 KCNK16Q96T55 309 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 NPY6RQ99463 290 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 TTLL2Q9BWV7 592 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 ULBP1Q9BZM6 244 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 ALG13Q9NP73 1137 aaKnown RBP13.02□□□□□ -0.33
TSEN54-204ENST00000577197 NGRNQ9NPE2 291 aaKnown RBP13.02□□□□□ -0.33
TSEN54-204ENST00000577197 TLR9Q9NR96 1032 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 HOMER3Q9NSC5 361 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 ABCC13Q9NSE7 274 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 ABI2Q9NYB9 513 aaPredicted RBP13.02□□□□□ -0.33
TSEN54-204ENST00000577197 CHORDC1Q9UHD1 332 aaPredicted RBP13.02□□□□□ -0.33
TSEN54-204ENST00000577197 CDY1Q9Y6F8 540 aa13.02□□□□□ -0.33
TSEN54-204ENST00000577197 GOLGA6L10A0A0M3HER8 536 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 WDR27A2RRH5 827 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 GRM6O15303 877 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 CYP2F1P24903 491 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 PPP3CCP48454 512 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 CACNA2D1P54289 1103 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 PLD1Q13393 1074 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 NNTQ13423 1086 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 PDK2Q15119 407 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 TAZQ16635 292 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 CCDC142Q17RM4 750 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 GLE1Q53GS7 698 aaKnown RBP13.01□□□□□ -0.33
TSEN54-204ENST00000577197 ACBD5Q5T8D3 534 aaPredicted RBP13.01□□□□□ -0.33
TSEN54-204ENST00000577197 DCAF12L1Q5VU92 463 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 GPR153Q6NV75 609 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 DENND5BQ6ZUT9 1274 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 RSRC2Q7L4I2 434 aaKnown RBP13.01□□□□□ -0.33
TSEN54-204ENST00000577197 BHLHA9Q7RTU4 235 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 TAS1R1Q7RTX1 841 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 TMC7Q7Z402 723 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 MMGT1Q8N4V1 131 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 CMASQ8NFW8 434 aaPredicted RBP13.01□□□□□ -0.33
TSEN54-204ENST00000577197 FAM71BQ8TC56 605 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 KRT35Q92764 455 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 NTAN1Q96AB6 310 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 PIWIL1Q96J94 861 aaKnown RBP13.01□□□□□ -0.33
TSEN54-204ENST00000577197 CDK5RAP1Q96SZ6 601 aaKnown RBP13.01□□□□□ -0.33
TSEN54-204ENST00000577197 CLSTN3Q9BQT9 956 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 FRMD8P1Q9BZ68 369 aaPredicted RBP13.01□□□□□ -0.33
TSEN54-204ENST00000577197 CERS4Q9HA82 394 aa13.01□□□□□ -0.33
TSEN54-204ENST00000577197 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.01□□□□□ -0.33
TSEN54-204ENST00000577197 CLIC5Q9NZA1 410 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms