RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 DUSP9Q99956 384 aaKnown RBP12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 FGFBP2Q9BYJ0 223 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 ZNF518BQ9C0D4 1074 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 NACA2Q9H009 215 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 HSPBP1Q9NZL4 362 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 CALCOCO1Q9P1Z2 691 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 PCDH15Q96QU1 1955 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 PCNX2A6NKB5 2137 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 A0A1W2PQD8 194 aa12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 FAM221BA6H8Z2 402 aa12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 A8MXQ7 604 aa12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 COCHO43405 550 aa12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 CD2BP2O95400 341 aaKnown RBP12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 DLATP10515 647 aaKnown RBP12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 PDCP20941 246 aa12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 SLC14A1Q13336 389 aa12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 SNRNP35Q16560 246 aaKnown RBP12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 WDR72Q3MJ13 1102 aa12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 C8orf34Q49A92 452 aa12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 CHPFQ8IZ52 775 aa12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 DEFB119Q8N690 84 aa12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 ZFRQ96KR1 1074 aaKnown RBP12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 CLIC6Q96NY7 704 aa12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 LRRC27Q9C0I9 530 aa12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 FAM124BQ9H5Z6 455 aaPredicted RBP12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 FSCN3Q9NQT6 498 aa12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 SPHK2Q9NRA0 654 aa12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 TMEM30AQ9NV96 361 aa12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 DNAAF2Q9NVR5 837 aaKnown RBP12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 STARD13Q9Y3M8 1113 aa12.36□□□□□ -0.43
CTDNEP1-212ENST00000576613 IGHV1OR15-9A0A0B4J2B8 117 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 CLDN5O00501 218 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 TRPC3Q13507 836 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 SYCP2LQ5T4T6 812 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 SNX30Q5VWJ9 437 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 GRAMD4Q6IC98 578 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 RAB44Q7Z6P3 723 aaPredicted RBP12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 TMEM25Q86YD3 366 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 BBS7Q8IWZ6 715 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 RGL4Q8IZJ4 473 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 CHCHD4Q8N4Q1 142 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 SYAP1Q96A49 352 aaPredicted RBP12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 CCDC127Q96BQ5 260 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 HSPA12BQ96MM6 686 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 XPO6Q96QU8 1125 aaKnown RBP12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 CGRRF1Q99675 332 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 MED10Q9BTT4 135 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 B3GNT5Q9BYG0 378 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 DPEP3Q9H4B8 488 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 DMAP1Q9NPF5 467 aaPredicted RBP12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 SUSD2Q9UGT4 822 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 CHORDC1Q9UHD1 332 aaPredicted RBP12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 NME7Q9Y5B8 376 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 PCDHB9Q9Y5E1 797 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 CACNA1EQ15878 2313 aa12.35□□□□□ -0.43
CTDNEP1-212ENST00000576613 MYO18AQ92614 2054 aaKnown RBP12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 GON4LQ3T8J9 2241 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 A0A1W2PQF6 199 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 EIF3DO15371 548 aaKnown RBP eCLIP12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 NDUFS2O75306 463 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 CLSTN1O94985 981 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 STAU1O95793 577 aaKnown RBP12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 CST3P01034 146 aaPredicted RBP12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 IRF1P10914 325 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 CD59P13987 128 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 GNSP15586 552 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 NDUFV2P19404 249 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 ATICP31939 592 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 WASP42768 502 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 SLC5A3P53794 718 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 CEBPZQ03701 1054 aaKnown RBP12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 GOLGA8FQ08AF8 430 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 GOLGA8DPQ0D2H9 430 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 PSMD6Q15008 389 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 PLEKHG6Q3KR16 790 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 FAM35AQ86V20 835 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 PROSER1Q86XN7 944 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 TRIML1Q8N9V2 468 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 RDH13Q8NBN7 331 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 IPO4Q8TEX9 1081 aaKnown RBP12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 SCFD1Q8WVM8 642 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 FOXJ1Q92949 421 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 SMARCD1Q96GM5 515 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 TNIP3Q96KP6 325 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 PANK2Q9BZ23 570 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 TNMDQ9H2S6 317 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 CCSER2Q9H7U1 834 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 UPF2Q9HAU5 1272 aaKnown RBP12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 DNAJC17Q9NVM6 304 aaKnown RBP12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 COMMD8Q9NX08 183 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 WDR35Q9P2L0 1181 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 NXF1Q9UBU9 619 aaKnown RBP12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 CYP8B1Q9UNU6 501 aa12.34□□□□□ -0.43
CTDNEP1-212ENST00000576613 FASNP49327 2511 aaKnown RBP12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 NEDD8-MDP1E9PL57 170 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 CACNG3O60359 315 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 CYP2J2P51589 502 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 SNRPFP62306 86 aaKnown RBP12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 FAM193AP78312 1265 aa12.33□□□□□ -0.44
CTDNEP1-212ENST00000576613 CYP24A1Q07973 514 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms