RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 E2F5Q15329 346 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 MDH1BQ5I0G3 518 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 SNX30Q5VWJ9 437 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 STXBP4Q6ZWJ1 553 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 SV2BQ7L1I2 683 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 DYMQ7RTS9 669 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 METTL3Q86U44 580 aaKnown RBP9.56□□□□□ -0.88
SMG6-218ENST00000575454 WDR49Q8IV35 697 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 SLC41A1Q8IVJ1 513 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 GPD1LQ8N335 351 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 NAT16Q8N8M0 369 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 PNPLA1Q8N8W4 532 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 GLIS3Q8NEA6 775 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 CADM4Q8NFZ8 388 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 OR6B3Q8NGW1 331 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 IPO4Q8TEX9 1081 aaKnown RBP9.56□□□□□ -0.88
SMG6-218ENST00000575454 SETD7Q8WTS6 366 aaKnown RBP9.56□□□□□ -0.88
SMG6-218ENST00000575454 NOC3LQ8WTT2 800 aaKnown RBP9.56□□□□□ -0.88
SMG6-218ENST00000575454 HNRNPLLQ8WVV9 542 aaKnown RBP9.56□□□□□ -0.88
SMG6-218ENST00000575454 FBXO32Q969P5 355 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 CAMK1GQ96NX5 476 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 GABRG3Q99928 467 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 NACA2Q9H009 215 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 IKZF4Q9H2S9 585 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 ZDHHC4Q9NPG8 344 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.56□□□□□ -0.887e-7■■■■■ 109.2
SMG6-218ENST00000575454 COMMD8Q9NX08 183 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 PCOLCE2Q9UKZ9 415 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 RAXQ9Y2V3 346 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 PCDHGB2Q9Y5G2 931 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 RALGAPA1Q6GYQ0 2036 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 GOLGA8IPA6NC78 632 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 GOLGA8JA6NMD2 632 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 SCAMP3O14828 347 aaKnown RBP9.55□□□□□ -0.88
SMG6-218ENST00000575454 NPC1O15118 1278 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 COCHO43405 550 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 CBFA2T3O75081 653 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 CER1O95813 267 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 NDUFV2P19404 249 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 OXTRP30559 389 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 TXLNAP40222 546 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 WNT7BP56706 349 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 TNNC1P63316 161 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 GOLGA8FQ08AF8 430 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 KCNA1Q09470 495 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 GOLGA8DPQ0D2H9 430 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 GRIK2Q13002 908 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 RRAGBQ5VZM2 374 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 TMPRSS7Q7RTY8 843 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 BRAPQ7Z569 592 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 TMEM25Q86YD3 366 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 BBS7Q8IWZ6 715 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 GALNT15Q8N3T1 639 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 SPRYD3Q8NCJ5 442 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 ENGASEQ8NFI3 743 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 OR2I1PQ8NGU4 316 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 DNASE2BQ8WZ79 361 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 ZFRQ96KR1 1074 aaKnown RBP9.55□□□□□ -0.88
SMG6-218ENST00000575454 CBWD1Q9BRT8 395 aa9.55□□□□□ -0.88
SMG6-218ENST00000575454 DNAJC17Q9NVM6 304 aaKnown RBP9.55□□□□□ -0.88
SMG6-218ENST00000575454 MEI4A8MW99 385 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 A8MXQ7 604 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 CACNG3O60359 315 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 WASP42768 502 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 IFRD2Q12894 506 aaPredicted RBP9.54□□□□□ -0.88
SMG6-218ENST00000575454 EGFLAMQ63HQ2 1017 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 HTR3DQ70Z44 454 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 TRAPPC11Q7Z392 1133 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 SLCO6A1Q86UG4 719 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 SCUBE3Q8IX30 993 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 B3GALNT2Q8NCR0 500 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 ZSWIM2Q8NEG5 633 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 OR5B17Q8NGF7 314 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 MDM1Q8TC05 714 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 DNAJC19Q96DA6 116 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 LRIG1Q96JA1 1093 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 MRGPRX1Q96LB2 322 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 BBS2Q9BXC9 721 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 ZNF518BQ9C0D4 1074 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 PCIF1Q9H4Z3 704 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 CD248Q9HCU0 757 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 MARK1Q9P0L2 795 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 TBC1D7Q9P0N9 293 aa9.54□□□□□ -0.88
SMG6-218ENST00000575454 CHORDC1Q9UHD1 332 aaPredicted RBP9.54□□□□□ -0.88
SMG6-218ENST00000575454 LSM7Q9UK45 103 aaKnown RBP9.54□□□□□ -0.88
SMG6-218ENST00000575454 NUP210Q8TEM1 1887 aaPredicted RBP9.53□□□□□ -0.88
SMG6-218ENST00000575454 A0A087WV48 116 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 E9PAM4 449 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 NEDD8-MDP1E9PL57 170 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 BCAT2O15382 392 aaPredicted RBP9.53□□□□□ -0.88
SMG6-218ENST00000575454 FLRT2O43155 660 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 STAU1O95793 577 aaKnown RBP9.53□□□□□ -0.88
SMG6-218ENST00000575454 ZDHHC11BP0C7U3 371 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 NCAM1P13591 858 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 TYRP14679 529 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 IDEP14735 1019 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 TNNI1P19237 187 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 ATICP31939 592 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 MATKP42679 507 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 DGKGP49619 791 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms