RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ENDOD1O94919 500 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 ZNF143P52747 638 aaPredicted RBP16.26■□□□□ 0.19
NUP88-207ENST00000573584 PTPN11Q06124 597 aaPredicted RBP16.26■□□□□ 0.19
NUP88-207ENST00000573584 RAB6CQ53S08 254 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 FAXCQ5TGI0 409 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 FAM160B1Q5W0V3 765 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 ATG16L1Q676U5 607 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 TMPRSS6Q8IU80 811 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 LRRC71Q8N4P6 559 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 FAM161BQ96MY7 647 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 C7orf26Q96N11 449 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 ACAP3Q96P50 834 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 WRNIP1Q96S55 665 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 BCO2Q9BYV7 579 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 RAB6CQ9H0N0 254 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 SDCBP2Q9H190 292 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 VPS33BQ9H267 617 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 VCXQ9H320 206 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 HMGXB4Q9UGU5 601 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 AP1B1Q10567 949 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 TMEM132AQ24JP5 1023 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 HSF5Q4G112 596 aaPredicted RBP16.26■□□□□ 0.19
NUP88-207ENST00000573584 ANGEL2Q5VTE6 544 aaKnown RBP16.26■□□□□ 0.19
NUP88-207ENST00000573584 MPZL3Q6UWV2 235 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 CATSPERGQ6ZRH7 1159 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 DPH6Q7L8W6 267 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 TREML1Q86YW5 311 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 DNERQ8NFT8 737 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 ZNF668Q96K58 619 aaPredicted RBP16.26■□□□□ 0.19
NUP88-207ENST00000573584 SMYD3Q9H7B4 428 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 ZNF180Q9UJW8 692 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 COL11A1P12107 1806 aaPredicted RBP16.26■□□□□ 0.19
NUP88-207ENST00000573584 CAPN14A8MX76 684 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 SMIM24O75264 130 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 NPTXRO95502 500 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 APRTP07741 180 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 KITP10721 976 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 OSBPP22059 807 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 AMPD1P23109 780 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 SP100P23497 879 aaPredicted RBP16.25■□□□□ 0.19
NUP88-207ENST00000573584 TCF7P36402 384 aaPredicted RBP16.25■□□□□ 0.19
NUP88-207ENST00000573584 MRPS5P82675 430 aaKnown RBP16.25■□□□□ 0.19
NUP88-207ENST00000573584 MXD4Q14582 209 aaPredicted RBP16.25■□□□□ 0.19
NUP88-207ENST00000573584 CHI3L2Q15782 390 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 TMEM130Q8N3G9 435 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 FBXO27Q8NI29 283 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 ZNF395Q9H8N7 513 aaPredicted RBP16.25■□□□□ 0.19
NUP88-207ENST00000573584 ZNF212Q9UDV6 495 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 HEY1Q9Y5J3 304 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 CCDC195A0A1B0GUA6 201 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 PIK3R2O00459 728 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 CYB561D2O14569 222 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 TRDMT1O14717 391 aaKnown RBP16.25■□□□□ 0.19
NUP88-207ENST00000573584 PRPSAP2O60256 369 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 RFPL1O75677 317 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 PDGFRAP16234 1089 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 GABRB2P47870 512 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 RAP1GDS1P52306 607 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 BMPR2Q13873 1038 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 CDO1Q16878 200 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 C15orf59Q2T9L4 293 aaPredicted RBP16.25■□□□□ 0.19
NUP88-207ENST00000573584 MDH1BQ5I0G3 518 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 NUDCD3Q8IVD9 361 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 APLFQ8IW19 511 aaPredicted RBP16.25■□□□□ 0.19
NUP88-207ENST00000573584 PLD5Q8N7P1 536 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 SPDYE1Q8NFV5 336 aaPredicted RBP16.25■□□□□ 0.19
NUP88-207ENST00000573584 UBA3Q8TBC4 463 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 TMEM176AQ96HP8 235 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 C12orf42Q96LP6 360 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 RNF157Q96PX1 679 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 CNPY3Q9BT09 278 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 FRMD8Q9BZ67 464 aaPredicted RBP16.25■□□□□ 0.19
NUP88-207ENST00000573584 ELOVL4Q9GZR5 314 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 POPDC2Q9HBU9 364 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 MARCOQ9UEW3 520 aaPredicted RBP16.25■□□□□ 0.19
NUP88-207ENST00000573584 SIX4Q9UIU6 781 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 CLGNO14967 610 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 MAP3K7O43318 606 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 MAGEC1O60732 1142 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 CXCL8P10145 99 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 DPEP1P16444 411 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 GPD1P21695 349 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 RBL1P28749 1068 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 GPD2P43304 727 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 KDSRQ06136 332 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 KRT81Q14533 505 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 ATF7IP2Q5U623 682 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 DCAF15Q66K64 600 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 TSHZ1Q6ZSZ6 1077 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 CYP4V2Q6ZWL3 525 aaPredicted RBP16.25■□□□□ 0.19
NUP88-207ENST00000573584 SAMD7Q7Z3H4 446 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 CAND1Q86VP6 1230 aaKnown RBP16.25■□□□□ 0.19
NUP88-207ENST00000573584 RBM15BQ8NDT2 890 aaKnown RBP16.25■□□□□ 0.19
NUP88-207ENST00000573584 RXFP2Q8WXD0 754 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 TSC22D3Q99576 134 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 WWP1Q9H0M0 922 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 HOXC10Q9NYD6 342 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 SCOCQ9UIL1 159 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 HACL1Q9UJ83 578 aa16.25■□□□□ 0.19
NUP88-207ENST00000573584 AFG3L2Q9Y4W6 797 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms