RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 STILQ15468 1287 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 ASIC2Q16515 512 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 CFAP221Q4G0U5 840 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 CELF5Q8N6W0 485 aaKnown RBP12.52□□□□□ -0.41
NDE1-206ENST00000572967 CCDC112Q8NEF3 446 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 OR8K1Q8NGG5 319 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 OR6B3Q8NGW1 331 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 MSANTD3Q96H12 275 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 PCED1BQ96HM7 432 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 FUBP3Q96I24 572 aaKnown RBP eCLIP12.52□□□□□ -0.41
NDE1-206ENST00000572967 NT5C1AQ9BXI3 368 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 NAA15Q9BXJ9 866 aaKnown RBP12.52□□□□□ -0.41
NDE1-206ENST00000572967 EBF3Q9H4W6 596 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 SMYD3Q9H7B4 428 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 C8orf33Q9H7E9 229 aaPredicted RBP12.52□□□□□ -0.41
NDE1-206ENST00000572967 LMAN1LQ9HAT1 526 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.52□□□□□ -0.411e-6■■■■■ 76.4
NDE1-206ENST00000572967 ATP8B3O60423 1300 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 USP34Q70CQ2 3546 aa12.52□□□□□ -0.41
NDE1-206ENST00000572967 MYO15AQ9UKN7 3530 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 C2orf78A6NCI8 922 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 MED7O43513 233 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 CILPO75339 1184 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 CKMP06732 381 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 CHRNB1P11230 501 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 ARSAP15289 507 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 GNL1P36915 607 aaPredicted RBP12.51□□□□□ -0.41
NDE1-206ENST00000572967 GRIK1P39086 918 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 JAM2P57087 298 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 USP4Q13107 963 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 TBX2Q13207 712 aaPredicted RBP12.51□□□□□ -0.41
NDE1-206ENST00000572967 LRRC32Q14392 662 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 ZNF528Q3MIS6 628 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 PPP1R2P3Q6NXS1 205 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 FAM171BQ6P995 826 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 TMEM270Q6UE05 265 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 LIMS2Q7Z4I7 341 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 SPC24Q8NBT2 197 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 RBBP8NLQ8NC74 664 aaPredicted RBP12.51□□□□□ -0.41
NDE1-206ENST00000572967 CPLX3Q8WVH0 158 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 TATDN2Q93075 761 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 TRMT2BQ96GJ1 504 aaKnown RBP12.51□□□□□ -0.41
NDE1-206ENST00000572967 KREMEN1Q96MU8 473 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 PANX2Q96RD6 677 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 SLC22A12Q96S37 553 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 DNAJC7Q99615 494 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 SEMA4AQ9H3S1 761 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 KIF9Q9HAQ2 790 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 HPS4Q9NQG7 708 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 THG1LQ9NWX6 298 aaKnown RBP12.51□□□□□ -0.41
NDE1-206ENST00000572967 ZSCAN32Q9NX65 697 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 SMG5Q9UPR3 1016 aaKnown RBP12.51□□□□□ -0.41
NDE1-206ENST00000572967 CEP83Q9Y592 693 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 PCDHGA2Q9Y5H1 932 aa12.51□□□□□ -0.41
NDE1-206ENST00000572967 EML5Q05BV3 1969 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 TRAV19A0A0A6YYK7 116 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 LRRC53A6NM62 1247 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 F8VP50 259 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 EPHB6O15197 1021 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 IPO7O95373 1038 aaKnown RBP12.5□□□□□ -0.41
NDE1-206ENST00000572967 WEE1P30291 646 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 MAGEA11P43364 429 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 CCR3P51677 355 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 CACNA2D1P54289 1103 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 SLC8A3P57103 927 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 USP46P62068 366 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 GAS6Q14393 721 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 MTF1Q14872 753 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 ZNF77Q15935 545 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 ITPRIPL2Q3MIP1 535 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 TDRD12Q587J7 1177 aaKnown RBP12.5□□□□□ -0.41
NDE1-206ENST00000572967 GJB7Q6PEY0 223 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 RALGPS2Q86X27 583 aaPredicted RBP12.5□□□□□ -0.41
NDE1-206ENST00000572967 ZNF677Q86XU0 584 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 KIAA2013Q8IYS2 634 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 FAM71AQ8IYT1 594 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 DCLK2Q8N568 766 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 ARL14EPQ8N8R7 260 aaPredicted RBP12.5□□□□□ -0.41
NDE1-206ENST00000572967 ATRIPQ8WXE1 791 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 BAP1Q92560 729 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 PDLIM2Q96JY6 352 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 ARID3AQ99856 593 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 IER2Q9BTL4 223 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 ZNF518BQ9C0D4 1074 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 ABHD10Q9NUJ1 306 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 TDP1Q9NUW8 608 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 NCDNQ9UBB6 729 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 ZMYM5Q9UJ78 669 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 CNTN6Q9UQ52 1028 aa12.5□□□□□ -0.41
NDE1-206ENST00000572967 F5P12259 2224 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 ATG2BQ96BY7 2078 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 OTOL1A6NHN0 477 aaPredicted RBP12.49□□□□□ -0.41
NDE1-206ENST00000572967 CLDN5O00501 218 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 TRIM66O15016 1216 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 GFPT2O94808 682 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 TDGF1P13385 188 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 CD19P15391 556 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 ACO1P21399 889 aaKnown RBP12.49□□□□□ -0.41
NDE1-206ENST00000572967 HNRNPH3P31942 346 aaKnown RBP12.49□□□□□ -0.41
NDE1-206ENST00000572967 NDST1P52848 882 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms