RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 ADGRG2Q8IZP9 1017 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 RBBP8NLQ8NC74 664 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 ATOH1Q92858 354 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 KLF16Q9BXK1 252 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 UBXN6Q9BZV1 441 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 FAM124BQ9H5Z6 455 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 PNPLA8Q9NP80 782 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 TLR8Q9NR97 1041 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 C2orf42Q9NWW7 574 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 CFAP97Q9P2B7 532 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 CNTN6Q9UQ52 1028 aa10.79□□□□□ -0.68
GTF3C1-213ENST00000571886 GOLGA6L22H0YM25 854 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 PIK3R2O00459 728 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 XPO1O14980 1071 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 GREM1O60565 184 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 TLR5O60602 858 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 PAEPP09466 180 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 SP9P0CG40 484 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 IRF1P10914 325 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 RARGP13631 454 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 TRIM21P19474 475 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 GJA4P35212 333 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 RPS9P46781 194 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 IFNAR2P48551 515 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 RGS7P49802 495 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 GALK1P51570 392 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 TKTL1P51854 596 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 PDGFRLQ15198 375 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 CNGA2Q16280 664 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 MAN2A1Q16706 1144 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 ARHGAP44Q17R89 818 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 VWA3BQ502W6 1294 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 FSTL4Q6MZW2 842 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 PKN3Q6P5Z2 889 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 TSSK4Q6SA08 328 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 LCLAT1Q6UWP7 414 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 GBP6Q6ZN66 633 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 Q6ZS52 159 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 CCDC186Q7Z3E2 898 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 ALYREFQ86V81 257 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 ENOX1Q8TC92 643 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 EZH1Q92800 747 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 TUBGCP2Q9BSJ2 902 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 ULBP1Q9BZM6 244 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 CHRDQ9H2X0 955 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 POLR3BQ9NW08 1133 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 SPATA6Q9NWH7 488 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 MRPS17Q9Y2R5 130 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 NFE2L3Q9Y4A8 694 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 DMDP11532 3685 aa10.78□□□□□ -0.68
GTF3C1-213ENST00000571886 FANCMQ8IYD8 2048 aa10.77□□□□□ -0.68
GTF3C1-213ENST00000571886 KCNJ18B7U540 433 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 TRDMT1O14717 391 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 NCAM2O15394 837 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 EGFP01133 1207 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 CYP17A1P05093 508 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 PNMA6AP0CW24 399 aaPredicted RBP10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 KRT5P13647 590 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 PRKCSHP14314 528 aaPredicted RBP10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 OPRD1P41143 372 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 SLC6A11P48066 632 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 TUBP50607 506 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 PDE6CP51160 858 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 BCAT1P54687 386 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 MESP2Q0VG99 397 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 BST2Q10589 180 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 CCINQ13939 588 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 KCNJ12Q14500 433 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 DHCR24Q15392 516 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 EXOC3L4Q17RC7 722 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 TMEM196Q5HYL7 178 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 PM20D1Q6GTS8 502 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 PMF1Q6P1K2 205 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 RHBDF2Q6PJF5 856 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 C12orf40Q86WS4 652 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 SFTPA1Q8IWL2 248 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 BBS7Q8IWZ6 715 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 SLC35F5Q8WV83 523 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 SECISBP2LQ93073 1101 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 P2RY11Q96G91 374 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 NDST4Q9H3R1 872 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 CYLDQ9NQC7 956 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 TAB2Q9NYJ8 693 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 DACH1Q9UI36 760 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 NAGPAQ9UK23 515 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 KIAA1257Q9ULG3 409 aa10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.77□□□□□ -0.69
GTF3C1-213ENST00000571886 CACNA1HO95180 2353 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 MYO15AQ9UKN7 3530 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 E2F8A0AVK6 867 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 GTPBP10A4D1E9 387 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 M0QYV0 167 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 LCP1P13796 627 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 ATP5C1P36542 298 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 PLA2G4AP47712 749 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 SATB1Q01826 763 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 CSTF1Q05048 431 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 ADIGQ0VDE8 80 aa10.76□□□□□ -0.69
GTF3C1-213ENST00000571886 TCP11X2Q5H9J9 407 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms