RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 TDP2O95551 362 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 HMGA1P17096 107 aaKnown RBP7.46□□□□□ -1.22
CHD3-213ENST00000571249 GNLYP22749 145 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 NTSR1P30989 418 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 LIFRP42702 1097 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 TNFRSF4P43489 277 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 CD97P48960 835 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 YARSP54577 528 aaKnown RBP7.46□□□□□ -1.22
CHD3-213ENST00000571249 USP4Q13107 963 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 NCOA4Q13772 614 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 CTTNQ14247 550 aaKnown RBP7.46□□□□□ -1.22
CHD3-213ENST00000571249 TGIF1Q15583 401 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 FAM187BQ17R55 369 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 INAVAQ3KP66 663 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 DCAF4L1Q3SXM0 396 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 ARMCX5Q6P1M9 558 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 RHBDF2Q6PJF5 856 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 ALKAL1Q6UXT8 129 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 USP37Q86T82 979 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 ZBTB8OSQ8IWT0 167 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 ADGRG2Q8IZP9 1017 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 PHTF2Q8N3S3 785 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 SAP25Q8TEE9 199 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 MTMR9Q96QG7 549 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 LXNQ9BS40 222 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 MTA3Q9BTC8 594 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 TRPC7Q9HCX4 862 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 TM9SF3Q9HD45 589 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 RBM28Q9NW13 759 aaKnown RBP7.46□□□□□ -1.22
CHD3-213ENST00000571249 RGL1Q9NZL6 768 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 HSFX1Q9UBD0 423 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 ADAMTS1Q9UHI8 967 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 SATB2Q9UPW6 733 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 FBN1P35555 2871 aaKnown RBP7.45□□□□□ -1.22
CHD3-213ENST00000571249 A0A087X0B3 334 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 ANKRD62A6NC57 917 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 WASH3PC4AMC7 463 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 M0QZQ0 153 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 ACKR2O00590 384 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 NOBOXO60393 691 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 RTN2O75298 545 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 CSO75390 466 aaKnown RBP7.45□□□□□ -1.22
CHD3-213ENST00000571249 TADA3O75528 432 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 DGAT1O75907 488 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 EDN1P05305 212 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 CKMP06732 381 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 ITGAVP06756 1048 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 KRT7P08729 469 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 USP17L7P0C7H9 530 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 CKMT2P17540 419 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 GNA11P29992 359 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 MCM5P33992 734 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 HSPA4P34932 840 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 MLLT10P55197 1068 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 OSTNP61366 133 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 SRSF11Q05519 484 aaKnown RBP7.45□□□□□ -1.22
CHD3-213ENST00000571249 DPYDQ12882 1025 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 BNIP3Q12983 259 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 DMP1Q13316 513 aaPredicted RBP7.45□□□□□ -1.22
CHD3-213ENST00000571249 ILKQ13418 452 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 MYBPC2Q14324 1141 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 DHCR24Q15392 516 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 PFKFB3Q16875 520 aaPredicted RBP7.45□□□□□ -1.22
CHD3-213ENST00000571249 XKR4Q5GH76 650 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 C3orf38Q5JPI3 329 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 CDCP2Q5VXM1 449 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 EGFLAMQ63HQ2 1017 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 PPP4R3AQ6IN85 833 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 SYNE3Q6ZMZ3 975 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 MAEAQ7L5Y9 396 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 TRMT11Q7Z4G4 463 aaKnown RBP7.45□□□□□ -1.22
CHD3-213ENST00000571249 NAT16Q8N8M0 369 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 ARL14EPQ8N8R7 260 aaPredicted RBP7.45□□□□□ -1.22
CHD3-213ENST00000571249 CEP120Q8N960 986 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 ETNPPLQ8TBG4 499 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 FAM174AQ8TBP5 190 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 HTR3CQ8WXA8 447 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 PRR11Q96HE9 360 aaPredicted RBP7.45□□□□□ -1.22
CHD3-213ENST00000571249 DYDC2Q96IM9 177 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 LRRC2Q9BYS8 371 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 C6orf106Q9H6K1 298 aaPredicted RBP7.45□□□□□ -1.22
CHD3-213ENST00000571249 ZNF71Q9NQZ8 489 aaPredicted RBP7.45□□□□□ -1.22
CHD3-213ENST00000571249 TOPORSQ9NS56 1045 aaPredicted RBP7.45□□□□□ -1.22
CHD3-213ENST00000571249 DKK3Q9UBP4 350 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 VAV3Q9UKW4 847 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 ATXN7L1Q9ULK2 861 aaPredicted RBP7.45□□□□□ -1.22
CHD3-213ENST00000571249 MAGED2Q9UNF1 606 aaPredicted RBP7.45□□□□□ -1.22
CHD3-213ENST00000571249 STARD13Q9Y3M8 1113 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 JMJD1CQ15652 2540 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 COL6A5A8TX70 2615 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 ESPL1Q14674 2120 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 KIF26BQ2KJY2 2108 aa7.45□□□□□ -1.22
CHD3-213ENST00000571249 TRAV19A0A0A6YYK7 116 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 LAD1O00515 517 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 ICMTO60725 284 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 PRKCGP05129 697 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 C7P10643 843 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 KCNE1P15382 129 aa7.44□□□□□ -1.22
CHD3-213ENST00000571249 WT1P19544 449 aaPredicted RBP7.44□□□□□ -1.22
CHD3-213ENST00000571249 ABCB4P21439 1286 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms