RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 DHX15O43143 795 aaKnown RBP16.01■□□□□ 0.15
SMG6-207ENST00000570756 DENRO43583 198 aaKnown RBP16.01■□□□□ 0.15
SMG6-207ENST00000570756 LSM8O95777 96 aaKnown RBP16.01■□□□□ 0.15
SMG6-207ENST00000570756 RAG1P15918 1043 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 FDFT1P37268 417 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 CACNB3P54284 484 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 MRPS5P82675 430 aaKnown RBP16.01■□□□□ 0.15
SMG6-207ENST00000570756 BTKQ06187 659 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 DPYSL3Q14195 570 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 DBN1Q16643 649 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 SPOPLQ6IQ16 392 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 PGM2L1Q6PCE3 622 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 THNSL1Q8IYQ7 743 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 RTKN2Q8IZC4 609 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 GFM2Q969S9 779 aaKnown RBP16.01■□□□□ 0.15
SMG6-207ENST00000570756 MRPS26Q9BYN8 205 aaKnown RBP16.01■□□□□ 0.15
SMG6-207ENST00000570756 SLC13A1Q9BZW2 595 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 ZC3H12CQ9C0D7 883 aaKnown RBP16.01■□□□□ 0.15
SMG6-207ENST00000570756 ANKEF1Q9NU02 776 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 RHBDL2Q9NX52 303 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 CDH22Q9UJ99 828 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 CNTN6Q9UQ52 1028 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 DMTF1Q9Y222 760 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 APOBEC2Q9Y235 224 aaKnown RBP16.01■□□□□ 0.15
SMG6-207ENST00000570756 DTNAQ9Y4J8 743 aa16.01■□□□□ 0.15
SMG6-207ENST00000570756 TMEM150BA6NC51 233 aa16■□□□□ 0.15
SMG6-207ENST00000570756 TTLL13PA6NNM8 815 aa16■□□□□ 0.15
SMG6-207ENST00000570756 MCF2LO15068 1137 aa16■□□□□ 0.15
SMG6-207ENST00000570756 KRT38O76015 456 aa16■□□□□ 0.15
SMG6-207ENST00000570756 BPGMP07738 259 aa16■□□□□ 0.15
SMG6-207ENST00000570756 OGDHQ02218 1023 aa16■□□□□ 0.15
SMG6-207ENST00000570756 PSMD6Q15008 389 aa16■□□□□ 0.15
SMG6-207ENST00000570756 RABGAP1LQ5R372 815 aa16■□□□□ 0.15
SMG6-207ENST00000570756 TDRD10Q5VZ19 366 aaKnown RBP16■□□□□ 0.15
SMG6-207ENST00000570756 KLHDC10Q6PID8 442 aa16■□□□□ 0.15
SMG6-207ENST00000570756 UNC45BQ8IWX7 931 aa16■□□□□ 0.15
SMG6-207ENST00000570756 FAM71DQ8N9W8 422 aa16■□□□□ 0.15
SMG6-207ENST00000570756 PPP1R14CQ8TAE6 165 aa16■□□□□ 0.15
SMG6-207ENST00000570756 EBF4Q9BQW3 602 aa16■□□□□ 0.15
SMG6-207ENST00000570756 NTPCRQ9BSD7 190 aaKnown RBP16■□□□□ 0.15
SMG6-207ENST00000570756 IDI2Q9BXS1 227 aa16■□□□□ 0.15
SMG6-207ENST00000570756 FAM96AQ9H5X1 160 aa16■□□□□ 0.15
SMG6-207ENST00000570756 XAB2Q9HCS7 855 aaKnown RBP16■□□□□ 0.15
SMG6-207ENST00000570756 THEGQ9P2T0 379 aa16■□□□□ 0.15
SMG6-207ENST00000570756 TCEAL9Q9UHQ7 104 aa16■□□□□ 0.15
SMG6-207ENST00000570756 ASTN2O75129 1339 aaPredicted RBP16■□□□□ 0.15
SMG6-207ENST00000570756 EXTL3O43909 919 aa16■□□□□ 0.15
SMG6-207ENST00000570756 TPP2P29144 1249 aaPredicted RBP16■□□□□ 0.15
SMG6-207ENST00000570756 HADHQ16836 314 aaKnown RBP16■□□□□ 0.15
SMG6-207ENST00000570756 LMBRD2Q68DH5 695 aaPredicted RBP16■□□□□ 0.15
SMG6-207ENST00000570756 FBXL19Q6PCT2 694 aa16■□□□□ 0.15
SMG6-207ENST00000570756 TMC7Q7Z402 723 aa16■□□□□ 0.15
SMG6-207ENST00000570756 ZNF606Q8WXB4 792 aa16■□□□□ 0.15
SMG6-207ENST00000570756 CMTM5Q96DZ9 223 aa16■□□□□ 0.15
SMG6-207ENST00000570756 AGBL1Q96MI9 1066 aa16■□□□□ 0.15
SMG6-207ENST00000570756 FRMD8Q9BZ67 464 aaPredicted RBP16■□□□□ 0.15
SMG6-207ENST00000570756 USP29Q9HBJ7 922 aa16■□□□□ 0.15
SMG6-207ENST00000570756 AGO4Q9HCK5 861 aaKnown RBP16■□□□□ 0.15
SMG6-207ENST00000570756 SF3B1O75533 1304 aaKnown RBP eCLIP16■□□□□ 0.15
SMG6-207ENST00000570756 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.99■□□□□ 0.15
SMG6-207ENST00000570756 TCRBV5S1A1TA0A578 114 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 TRDMT1O14717 391 aaKnown RBP15.99■□□□□ 0.15
SMG6-207ENST00000570756 C4BPAP04003 597 aaKnown RBP15.99■□□□□ 0.15
SMG6-207ENST00000570756 HMGB2P26583 209 aaKnown RBP15.99■□□□□ 0.15
SMG6-207ENST00000570756 HIRAP54198 1017 aaPredicted RBP15.99■□□□□ 0.15
SMG6-207ENST00000570756 EIF3EP60228 445 aaKnown RBP15.99■□□□□ 0.15
SMG6-207ENST00000570756 TBL3Q12788 808 aaKnown RBP15.99■□□□□ 0.15
SMG6-207ENST00000570756 RALGPS1Q5JS13 557 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 OGFRL1Q5TC84 451 aaPredicted RBP15.99■□□□□ 0.15
SMG6-207ENST00000570756 SH3BP5LQ7L8J4 393 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 PIWIL2Q8TC59 973 aaKnown RBP15.99■□□□□ 0.15
SMG6-207ENST00000570756 CHURC1Q8WUH1 139 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 CCDC124Q96CT7 223 aaKnown RBP15.99■□□□□ 0.15
SMG6-207ENST00000570756 CFAP36Q96G28 342 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 FAM84AQ96KN4 292 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 ZNF395Q9H8N7 513 aaPredicted RBP15.99■□□□□ 0.15
SMG6-207ENST00000570756 TBC1D22BQ9NU19 505 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 C6orf203Q9P0P8 240 aaPredicted RBP15.99■□□□□ 0.15
SMG6-207ENST00000570756 FAM198AQ9UFP1 575 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 POMPQ9Y244 141 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 ZNF510Q9Y2H8 683 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 LTBP1Q14766 1721 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 A0A0J9YVX5 310 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 RFPL1O75677 317 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 PDE5AO76074 875 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 TNFAIP8O95379 198 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 PROCP04070 461 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 TFAP2AP05549 437 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 SULT2A1Q06520 285 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 CES4AQ5XG92 561 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 TRMT1LQ7Z2T5 733 aaKnown RBP15.99■□□□□ 0.15
SMG6-207ENST00000570756 SAMD3Q8N6K7 520 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 TMEM35BQ8NCS4 154 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 DNAJC1Q96KC8 554 aaKnown RBP15.99■□□□□ 0.15
SMG6-207ENST00000570756 GCNAQ96QF7 691 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 DHX33Q9H6R0 707 aaKnown RBP15.99■□□□□ 0.15
SMG6-207ENST00000570756 NRDE2Q9H7Z3 1164 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 SLC9A2Q9UBY0 812 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 TTLL3Q9Y4R7 772 aa15.99■□□□□ 0.15
SMG6-207ENST00000570756 hCG_2014768A0A024R1R8 64 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms