RNA–Protein interactions for RNA: ENST00000569963.1

NAE1-222, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-222ENST00000569963 MYO10Q9HD67 2058 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 NCOR1O75376 2440 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 A0A1W2PQH9 124 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 PRAMEF12O95522 483 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 LSM8O95777 96 aaKnown RBP20.74■□□□□ 0.91
NAE1-222ENST00000569963 CKMP06732 381 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 LCP1P13796 627 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 FERP16591 822 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 PSMC3P17980 439 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 SNX16P57768 344 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 ZXDAP98168 799 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 CDR2Q01850 454 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 KLHDC10Q6PID8 442 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 VITQ6UXI7 678 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 BHLHA9Q7RTU4 235 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 TADA2BQ86TJ2 420 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 GAS2L3Q86XJ1 694 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 KIAA1958Q8N8K9 716 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 TMEM35BQ8NCS4 154 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 KHSRPQ92945 711 aaKnown RBP eCLIP20.74■□□□□ 0.91
NAE1-222ENST00000569963 CDK5RAP1Q96SZ6 601 aaKnown RBP20.74■□□□□ 0.91
NAE1-222ENST00000569963 PDCL3Q9H2J4 239 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 NMUR1Q9HB89 426 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.74■□□□□ 0.91
NAE1-222ENST00000569963 OSER1Q9NX31 292 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 AIPL1Q9NZN9 384 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 DUSP12Q9UNI6 340 aa20.74■□□□□ 0.91
NAE1-222ENST00000569963 COCHO43405 550 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 TLR5O60602 858 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 RALAP11233 206 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 SRFP11831 508 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 RARGP13631 454 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 DAOAP59103 153 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 YWHAGP61981 247 aaKnown RBP eCLIP20.73■□□□□ 0.91
NAE1-222ENST00000569963 FCHO2Q0JRZ9 810 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 PDCLQ13371 301 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 IRF2BP2Q7Z5L9 587 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 PASD1Q8IV76 773 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 ST13P5Q8NFI4 369 aaPredicted RBP20.73■□□□□ 0.91
NAE1-222ENST00000569963 BPIFB1Q8TDL5 484 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 EDAQ92838 391 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 RSPRY1Q96DX4 576 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 TRMT61BQ9BVS5 477 aaKnown RBP20.73■□□□□ 0.91
NAE1-222ENST00000569963 SMG9Q9H0W8 520 aaKnown RBP20.73■□□□□ 0.91
NAE1-222ENST00000569963 NUCKS1Q9H1E3 243 aaKnown RBP20.73■□□□□ 0.91
NAE1-222ENST00000569963 CCSER2Q9H7U1 834 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 SLC2A4RGQ9NR83 387 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 ST7Q9NRC1 585 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 NAGPAQ9UK23 515 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.73■□□□□ 0.91
NAE1-222ENST00000569963 TTC28Q96AY4 2481 aa20.73■□□□□ 0.91
NAE1-222ENST00000569963 LRRC53A6NM62 1247 aa20.72■□□□□ 0.91
NAE1-222ENST00000569963 SART1O43290 800 aaKnown RBP20.72■□□□□ 0.91
NAE1-222ENST00000569963 MMEP08473 750 aa20.72■□□□□ 0.91
NAE1-222ENST00000569963 ATP5C1P36542 298 aaKnown RBP20.72■□□□□ 0.91
NAE1-222ENST00000569963 TAF3Q5VWG9 929 aa20.72■□□□□ 0.91
NAE1-222ENST00000569963 TRIM72Q6ZMU5 477 aa20.72■□□□□ 0.91
NAE1-222ENST00000569963 GPIHBP1Q8IV16 184 aa20.72■□□□□ 0.91
NAE1-222ENST00000569963 SCUBE3Q8IX30 993 aa20.72■□□□□ 0.91
NAE1-222ENST00000569963 ZNF397Q8NF99 534 aaPredicted RBP20.72■□□□□ 0.91
NAE1-222ENST00000569963 PPP1R13BQ96KQ4 1090 aa20.72■□□□□ 0.91
NAE1-222ENST00000569963 LRRC3BQ96PB8 259 aa20.72■□□□□ 0.91
NAE1-222ENST00000569963 CAPN11Q9UMQ6 739 aa20.72■□□□□ 0.91
NAE1-222ENST00000569963 CCL26Q9Y258 94 aa20.72■□□□□ 0.91
NAE1-222ENST00000569963 MYO16Q9Y6X6 1858 aa20.72■□□□□ 0.91
NAE1-222ENST00000569963 YJEFN3A6XGL0 299 aa20.71■□□□□ 0.91
NAE1-222ENST00000569963 E5RJQ4 531 aa20.71■□□□□ 0.91
NAE1-222ENST00000569963 E7ENQ6 273 aa20.71■□□□□ 0.91
NAE1-222ENST00000569963 CHRNB2P17787 502 aa20.71■□□□□ 0.91
NAE1-222ENST00000569963 GPC5P78333 572 aa20.71■□□□□ 0.91
NAE1-222ENST00000569963 FMO1Q01740 532 aa20.71■□□□□ 0.91
NAE1-222ENST00000569963 ARID5AQ03989 594 aa20.71■□□□□ 0.91
NAE1-222ENST00000569963 SFMBT2Q5VUG0 894 aa20.71■□□□□ 0.91
NAE1-222ENST00000569963 BSPRYQ5W0U4 402 aa20.71■□□□□ 0.91
NAE1-222ENST00000569963 SPECC1LQ69YQ0 1117 aa20.71■□□□□ 0.91
NAE1-222ENST00000569963 DDX42Q86XP3 938 aaKnown RBP eCLIP20.71■□□□□ 0.91
NAE1-222ENST00000569963 C1orf131Q8NDD1 294 aaKnown RBP20.71■□□□□ 0.91
NAE1-222ENST00000569963 SLC20A1Q8WUM9 679 aa20.71■□□□□ 0.91
NAE1-222ENST00000569963 NDRG1Q92597 394 aaKnown RBP20.71■□□□□ 0.91
NAE1-222ENST00000569963 SYN2Q92777 582 aaPredicted RBP20.71■□□□□ 0.91
NAE1-222ENST00000569963 CPXM1Q96SM3 734 aa20.71■□□□□ 0.91
NAE1-222ENST00000569963 TRPV5Q9NQA5 729 aa20.71■□□□□ 0.91
NAE1-222ENST00000569963 ABCC13Q9NSE7 274 aa20.71■□□□□ 0.91
NAE1-222ENST00000569963 THG1LQ9NWX6 298 aaKnown RBP20.71■□□□□ 0.91
NAE1-222ENST00000569963 PIK3R2O00459 728 aa20.7■□□□□ 0.9
NAE1-222ENST00000569963 CHADO15335 359 aa20.7■□□□□ 0.9
NAE1-222ENST00000569963 NARSO43776 548 aaKnown RBP20.7■□□□□ 0.9
NAE1-222ENST00000569963 CYP1A1P04798 512 aaPredicted RBP20.7■□□□□ 0.9
NAE1-222ENST00000569963 MBL2P11226 248 aaPredicted RBP20.7■□□□□ 0.9
NAE1-222ENST00000569963 ZBED6P86452 979 aa20.7■□□□□ 0.9
NAE1-222ENST00000569963 ZXDBP98169 803 aa20.7■□□□□ 0.9
NAE1-222ENST00000569963 PLCB2Q00722 1185 aa20.7■□□□□ 0.9
NAE1-222ENST00000569963 PFKPQ01813 784 aa20.7■□□□□ 0.9
NAE1-222ENST00000569963 USP4Q13107 963 aa20.7■□□□□ 0.9
NAE1-222ENST00000569963 ZNF77Q15935 545 aa20.7■□□□□ 0.9
NAE1-222ENST00000569963 ARHGAP29Q52LW3 1261 aa20.7■□□□□ 0.9
NAE1-222ENST00000569963 BTBD8Q5XKL5 378 aa20.7■□□□□ 0.9
NAE1-222ENST00000569963 BEND5Q7L4P6 421 aa20.7■□□□□ 0.9
NAE1-222ENST00000569963 YAF2Q8IY57 180 aa20.7■□□□□ 0.9
NAE1-222ENST00000569963 SH3RF2Q8TEC5 729 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms