RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 MTMR3Q13615 1198 aa16.85■□□□□ 0.29
USB1-215ENST00000569252 ARHGAP15Q53QZ3 475 aa16.85■□□□□ 0.29
USB1-215ENST00000569252 HGSNATQ68CP4 663 aa16.85■□□□□ 0.29
USB1-215ENST00000569252 ACAD10Q6JQN1 1059 aa16.85■□□□□ 0.29
USB1-215ENST00000569252 CCDC170Q8IYT3 715 aa16.85■□□□□ 0.29
USB1-215ENST00000569252 SCAMP5Q8TAC9 235 aa16.85■□□□□ 0.29
USB1-215ENST00000569252 TRMT2BQ96GJ1 504 aaKnown RBP16.85■□□□□ 0.29
USB1-215ENST00000569252 BAG1Q99933 345 aaPredicted RBP16.85■□□□□ 0.29
USB1-215ENST00000569252 ATXN3LQ9H3M9 355 aa16.85■□□□□ 0.29
USB1-215ENST00000569252 CNGB3Q9NQW8 809 aa16.85■□□□□ 0.29
USB1-215ENST00000569252 TLR8Q9NR97 1041 aaKnown RBP16.85■□□□□ 0.29
USB1-215ENST00000569252 ADAM22Q9P0K1 906 aa16.85■□□□□ 0.29
USB1-215ENST00000569252 STRIP2Q9ULQ0 834 aa16.85■□□□□ 0.29
USB1-215ENST00000569252 TULP2O00295 520 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 PIK3R2O00459 728 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 TNFRSF10BO14763 440 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 GALR2O43603 387 aaPredicted RBP16.84■□□□□ 0.29
USB1-215ENST00000569252 RTN2O75298 545 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 CYP1A1P04798 512 aaPredicted RBP16.84■□□□□ 0.29
USB1-215ENST00000569252 CALB1P05937 261 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 RHOP08100 348 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 USP17L7P0C7H9 530 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 GABRR2P28476 465 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 CDH5P33151 784 aaPredicted RBP16.84■□□□□ 0.29
USB1-215ENST00000569252 PSEN1P49768 467 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 ADIGQ0VDE8 80 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 TAF10Q12962 218 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 MAPK8IP2Q13387 824 aaPredicted RBP16.84■□□□□ 0.29
USB1-215ENST00000569252 SPA17Q15506 151 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 RAB41Q5JT25 222 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 CCDC122Q5T0U0 273 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 E4F1Q66K89 784 aaPredicted RBP16.84■□□□□ 0.29
USB1-215ENST00000569252 OR6B2Q6IFH4 312 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 WDR59Q6PJI9 974 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 TADA2BQ86TJ2 420 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 TMEM110Q86TL2 294 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 MON1AQ86VX9 555 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 ZDHHC17Q8IUH5 632 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 SCUBE3Q8IX30 993 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 WDTC1Q8N5D0 677 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 SLC30A5Q8TAD4 765 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 OVCA2Q8WZ82 227 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 MRPS31Q92665 395 aaKnown RBP16.84■□□□□ 0.29
USB1-215ENST00000569252 MYRFLQ96LU7 910 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 TRIM62Q9BVG3 475 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 SLC4A5Q9BY07 1137 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 LUC7LQ9NQ29 371 aaKnown RBP16.84■□□□□ 0.29
USB1-215ENST00000569252 TMEM30AQ9NV96 361 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 ARHGAP20Q9P2F6 1191 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 DNMT3BQ9UBC3 853 aaKnown RBP16.84■□□□□ 0.29
USB1-215ENST00000569252 CHORDC1Q9UHD1 332 aaPredicted RBP16.84■□□□□ 0.29
USB1-215ENST00000569252 SCML2Q9UQR0 700 aa16.84■□□□□ 0.29
USB1-215ENST00000569252 MRPS23Q9Y3D9 190 aaKnown RBP16.84■□□□□ 0.29
USB1-215ENST00000569252 HHLA1C9JL84 531 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 FTLP02792 175 aaPredicted RBP16.83■□□□□ 0.28
USB1-215ENST00000569252 PLEKP08567 350 aaPredicted RBP16.83■□□□□ 0.28
USB1-215ENST00000569252 RALAP11233 206 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 UNGP13051 313 aaPredicted RBP16.83■□□□□ 0.28
USB1-215ENST00000569252 FSHRP23945 695 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 NOMO3P69849 1222 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 TOGARAM2Q6ZUX3 1019 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 HS6ST3Q8IZP7 471 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 CCDC112Q8NEF3 446 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 ST13P5Q8NFI4 369 aaPredicted RBP16.83■□□□□ 0.28
USB1-215ENST00000569252 IRGQQ8WZA9 623 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 ZNF707Q96C28 371 aaPredicted RBP16.83■□□□□ 0.28
USB1-215ENST00000569252 TRIM11Q96F44 468 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 VCPIP1Q96JH7 1222 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 PCDHB18PQ96TA0 734 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 CHP1Q99653 195 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 TTLL2Q9BWV7 592 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 ULBP1Q9BZM6 244 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 NACA2Q9H009 215 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 HCFC1R1Q9NWW0 138 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 WDR35Q9P2L0 1181 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 ZMYM5Q9UJ78 669 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 SORCS3Q9UPU3 1222 aa16.83■□□□□ 0.28
USB1-215ENST00000569252 MTCL1Q9Y4B5 1905 aaKnown RBP16.83■□□□□ 0.28
USB1-215ENST00000569252 PRR23AA6NEV1 266 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 E5RJQ4 531 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 DDX3XO00571 662 aaKnown RBP eCLIP16.82■□□□□ 0.282e-15■■■■■ 27.4
USB1-215ENST00000569252 CAPN9O14815 690 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 PI15O43692 258 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 HMGA1P17096 107 aaKnown RBP16.82■□□□□ 0.28
USB1-215ENST00000569252 USP46P62068 366 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 CENPCQ03188 943 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 CCDC173Q0VFZ6 552 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 SLC18A3Q16572 532 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 EFHC1Q5JVL4 640 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 C10orf76Q5T2E6 689 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 BTBD8Q5XKL5 378 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 CWF19L1Q69YN2 538 aaKnown RBP16.82■□□□□ 0.28
USB1-215ENST00000569252 ALKBH5Q6P6C2 394 aaKnown RBP16.82■□□□□ 0.28
USB1-215ENST00000569252 FLCNQ8NFG4 579 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 CPXM1Q96SM3 734 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 CDK5RAP1Q96SZ6 601 aaKnown RBP16.82■□□□□ 0.28
USB1-215ENST00000569252 PRRX2Q99811 253 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 SLITRK6Q9H5Y7 841 aa16.82■□□□□ 0.28
USB1-215ENST00000569252 WDR6Q9NNW5 1121 aaKnown RBP16.82■□□□□ 0.28
USB1-215ENST00000569252 AVENQ9NQS1 362 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms