RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	OSR1	Q8TAX0	266 aa	Predicted RBP	4.16	□□□□□ -1.74
UBR1-209	ENST00000569243	PPP1R9B	Q96SB3	815 aa		4.16	□□□□□ -1.74
UBR1-209	ENST00000569243	RHOBTB2	Q9BYZ6	727 aa		4.16	□□□□□ -1.74
UBR1-209	ENST00000569243	LOC102723971	A0A1B0GUV8	181 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	MBD3L3	A6NE82	208 aa	Predicted RBP	4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	ISM1	B1AKI9	464 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	PRSS44	E7EML9	344 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	RFPL1	O75677	317 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	ALDH1L1	O75891	902 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	VNN1	O95497	513 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	APEH	P13798	732 aa	Known RBP	4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	UQCRC1	P31930	480 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	THBS4	P35443	961 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	DIO1	P49895	249 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	HSF1	Q00613	529 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	CFHR3	Q02985	330 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	CFHR1	Q03591	330 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	PIN1	Q13526	163 aa	Predicted RBP	4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	DPY19L3	Q6ZPD9	716 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	PIP4P1	Q86T03	277 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	TMEM171	Q8WVE6	324 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	MAP4K1	Q92918	833 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	WBP1	Q96G27	269 aa		4.15	□□□□□ -1.75
UBR1-209	ENST00000569243	hCG_2014768	A0A024R1R8	64 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243		A8MVJ9	347 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	CD3EAP	O15446	510 aa	Known RBP	4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	FRS3	O43559	492 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	CD19	P15391	556 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	MTHFS	P49914	203 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	ANAPC15	P60006	121 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	RPS13	P62277	151 aa	Known RBP	4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	ID2	Q02363	134 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	PTCHD3	Q3KNS1	767 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	TMTC4	Q5T4D3	741 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	TMEM65	Q6PI78	240 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	RANBP10	Q6VN20	620 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	CHPF	Q8IZ52	775 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	IL31RA	Q8NI17	732 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	RAPGEF4	Q8WZA2	1011 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	SPSB4	Q96A44	273 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	ZNF668	Q96K58	619 aa	Predicted RBP	4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	TAAR9	Q96RI9	348 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	TMEM60	Q9H2L4	133 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	FAM83D	Q9H4H8	585 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	ZMAT3	Q9HA38	289 aa	Known RBP	4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	POT1	Q9NUX5	634 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	DNMT3B	Q9UBC3	853 aa	Known RBP	4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	MGAT4C	Q9UBM8	478 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	STAP2	Q9UGK3	403 aa		4.14	□□□□□ -1.75
UBR1-209	ENST00000569243	TUSC2	O75896	110 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	ALPL	P05186	524 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	PDGFRB	P09619	1106 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	CREB1	P16220	341 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	ATF7	P17544	494 aa	Predicted RBP	4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	SCP2	P22307	547 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	ME1	P48163	572 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	THBS3	P49746	956 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	COPB1	P53618	953 aa	Known RBP	4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	MCL1	Q07820	350 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	TTF1	Q15361	905 aa	Predicted RBP	4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	LEXM	Q3ZCV2	418 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	DGKK	Q5KSL6	1271 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	DCAF12L1	Q5VU92	463 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	DCDC5	Q6ZRR9	648 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	MAEA	Q7L5Y9	396 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	MICU3	Q86XE3	530 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	MPP5	Q8N3R9	675 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	DNAJB14	Q8TBM8	379 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	JPH3	Q8WXH2	748 aa	Predicted RBP	4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	NMD3	Q96D46	503 aa	Known RBP	4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	ZFYVE19	Q96K21	471 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	LYZL4	Q96KX0	146 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	ACO2	Q99798	780 aa	Known RBP	4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	KRTAP4-3	Q9BYR4	195 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	ZCWPW1	Q9H0M4	648 aa		4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	DDX56	Q9NY93	547 aa	Known RBP	4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	TCF20	Q9UGU0	1960 aa	Known RBP	4.13	□□□□□ -1.75
UBR1-209	ENST00000569243	TRIM43B	A6NCK2	446 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	SPRY2	O43597	315 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	CTSA	P10619	480 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	KIT	P10721	976 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	KLRC1	P26715	233 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	HOXD9	P28356	352 aa	Predicted RBP	4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	GATM	P50440	423 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	EPHB1	P54762	984 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	NANOS2	P60321	138 aa	Known RBP	4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	NPY5R	Q15761	445 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	TRIM71	Q2Q1W2	868 aa	Known RBP	4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	NPNT	Q6UXI9	565 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	C9orf47	Q6ZRZ4	202 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	SKAP1	Q86WV1	359 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	FAM177A1	Q8N128	213 aa	Predicted RBP	4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	ARFGAP1	Q8N6T3	406 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	C12orf76	Q8N812	135 aa	Predicted RBP	4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	BCAS4	Q8TDM0	211 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	STAG1	Q8WVM7	1258 aa		4.12	□□□□□ -1.75
UBR1-209	ENST00000569243	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.12	□□□□□ -1.75

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