RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 WBP2Q969T9 261 aa21.25■□□□□ 0.99
ABCA3-206ENST00000569062 NMUR1Q9HB89 426 aa21.25■□□□□ 0.99
ABCA3-206ENST00000569062 K7ESF4 209 aa21.24■□□□□ 0.99
ABCA3-206ENST00000569062 PMM2O15305 246 aa21.24■□□□□ 0.99
ABCA3-206ENST00000569062 RNF40O75150 1001 aa21.24■□□□□ 0.99
ABCA3-206ENST00000569062 DRD1P21728 446 aa21.24■□□□□ 0.99
ABCA3-206ENST00000569062 DMWDQ09019 674 aa21.24■□□□□ 0.99
ABCA3-206ENST00000569062 TTC30AQ86WT1 665 aa21.24■□□□□ 0.99
ABCA3-206ENST00000569062 TRIM59Q8IWR1 403 aa21.24■□□□□ 0.99
ABCA3-206ENST00000569062 LMO3Q8TAP4 145 aa21.24■□□□□ 0.99
ABCA3-206ENST00000569062 FAM126AQ9BYI3 521 aaPredicted RBP21.24■□□□□ 0.99
ABCA3-206ENST00000569062 NACA2Q9H009 215 aa21.24■□□□□ 0.99
ABCA3-206ENST00000569062 A0A1W2PQH9 124 aa21.23■□□□□ 0.99
ABCA3-206ENST00000569062 E2F8A0AVK6 867 aa21.23■□□□□ 0.99
ABCA3-206ENST00000569062 SLC9A3R1O14745 358 aaPredicted RBP21.23■□□□□ 0.99
ABCA3-206ENST00000569062 PAPSS2O95340 614 aaPredicted RBP21.23■□□□□ 0.99
ABCA3-206ENST00000569062 IRF1P10914 325 aa21.23■□□□□ 0.99
ABCA3-206ENST00000569062 TBXAS1P24557 533 aaPredicted RBP21.23■□□□□ 0.99
ABCA3-206ENST00000569062 OPRD1P41143 372 aa21.23■□□□□ 0.99
ABCA3-206ENST00000569062 NRLP54845 237 aa21.23■□□□□ 0.99
ABCA3-206ENST00000569062 MARSP56192 900 aaKnown RBP21.23■□□□□ 0.99
ABCA3-206ENST00000569062 KCNH2Q12809 1159 aa21.23■□□□□ 0.99
ABCA3-206ENST00000569062 DHCR24Q15392 516 aa21.23■□□□□ 0.99
ABCA3-206ENST00000569062 RHBDF2Q6PJF5 856 aa21.23■□□□□ 0.99
ABCA3-206ENST00000569062 KAT5Q92993 513 aa21.23■□□□□ 0.99
ABCA3-206ENST00000569062 NT5C1BQ96P26 610 aa21.23■□□□□ 0.99
ABCA3-206ENST00000569062 MED15Q96RN5 788 aa21.23■□□□□ 0.99
ABCA3-206ENST00000569062 CYLDQ9NQC7 956 aa21.23■□□□□ 0.99
ABCA3-206ENST00000569062 NUDT5Q9UKK9 219 aa21.23■□□□□ 0.99
ABCA3-206ENST00000569062 SH3BP1Q9Y3L3 701 aa21.23■□□□□ 0.99
ABCA3-206ENST00000569062 USP3Q9Y6I4 520 aa21.23■□□□□ 0.99
ABCA3-206ENST00000569062 RIF1Q5UIP0 2472 aaKnown RBP21.22■□□□□ 0.99
ABCA3-206ENST00000569062 GNA14O95837 355 aa21.22■□□□□ 0.99
ABCA3-206ENST00000569062 RARGP13631 454 aa21.22■□□□□ 0.99
ABCA3-206ENST00000569062 YWHAEP62258 255 aaKnown RBP21.22■□□□□ 0.99
ABCA3-206ENST00000569062 GOLGA7BQ2TAP0 167 aa21.22■□□□□ 0.99
ABCA3-206ENST00000569062 CCDC186Q7Z3E2 898 aa21.22■□□□□ 0.99
ABCA3-206ENST00000569062 SCD5Q86SK9 330 aa21.22■□□□□ 0.99
ABCA3-206ENST00000569062 PIGZQ86VD9 579 aa21.22■□□□□ 0.99
ABCA3-206ENST00000569062 PPM1KQ8N3J5 372 aa21.22■□□□□ 0.99
ABCA3-206ENST00000569062 ANKRD52Q8NB46 1076 aa21.22■□□□□ 0.99
ABCA3-206ENST00000569062 EXOC4Q96A65 974 aa21.22■□□□□ 0.99
ABCA3-206ENST00000569062 KLF16Q9BXK1 252 aaPredicted RBP21.22■□□□□ 0.99
ABCA3-206ENST00000569062 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.22■□□□□ 0.99
ABCA3-206ENST00000569062 POLR3BQ9NW08 1133 aaPredicted RBP21.22■□□□□ 0.99
ABCA3-206ENST00000569062 TBC1D14Q9P2M4 693 aa21.22■□□□□ 0.99
ABCA3-206ENST00000569062 TSPAN16Q9UKR8 245 aa21.22■□□□□ 0.99
ABCA3-206ENST00000569062 FAM186AA6NE01 2351 aa21.22■□□□□ 0.99
ABCA3-206ENST00000569062 CHURC1-FNTBB4DL54 471 aa21.21■□□□□ 0.99
ABCA3-206ENST00000569062 TULP2O00295 520 aa21.21■□□□□ 0.99
ABCA3-206ENST00000569062 MDM4O15151 490 aa21.21■□□□□ 0.99
ABCA3-206ENST00000569062 P4HA2O15460 535 aa21.21■□□□□ 0.99
ABCA3-206ENST00000569062 CD19P15391 556 aa21.21■□□□□ 0.99
ABCA3-206ENST00000569062 ATP5C1P36542 298 aaKnown RBP21.21■□□□□ 0.99
ABCA3-206ENST00000569062 FNTBP49356 437 aa21.21■□□□□ 0.99
ABCA3-206ENST00000569062 SGO2Q562F6 1265 aa21.21■□□□□ 0.99
ABCA3-206ENST00000569062 HEATR6Q6AI08 1181 aaKnown RBP21.21■□□□□ 0.99
ABCA3-206ENST00000569062 ARHGEF19Q8IW93 802 aa21.21■□□□□ 0.99
ABCA3-206ENST00000569062 BBS7Q8IWZ6 715 aa21.21■□□□□ 0.99
ABCA3-206ENST00000569062 UBXN6Q9BZV1 441 aa21.21■□□□□ 0.99
ABCA3-206ENST00000569062 CLSTN2Q9H4D0 955 aa21.21■□□□□ 0.99
ABCA3-206ENST00000569062 RWDD2AQ9UIY3 292 aa21.21■□□□□ 0.99
ABCA3-206ENST00000569062 NAGPAQ9UK23 515 aa21.21■□□□□ 0.99
ABCA3-206ENST00000569062 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.21■□□□□ 0.99
ABCA3-206ENST00000569062 ANTXRLA6NF34 631 aa21.2■□□□□ 0.98
ABCA3-206ENST00000569062 RNF225M0QZC1 329 aaPredicted RBP21.2■□□□□ 0.98
ABCA3-206ENST00000569062 AFPP02771 609 aaKnown RBP21.2■□□□□ 0.98
ABCA3-206ENST00000569062 CCDC192P0DO97 292 aa21.2■□□□□ 0.98
ABCA3-206ENST00000569062 SLC6A11P48066 632 aa21.2■□□□□ 0.98
ABCA3-206ENST00000569062 PDE4CQ08493 712 aa21.2■□□□□ 0.98
ABCA3-206ENST00000569062 CETN1Q12798 172 aa21.2■□□□□ 0.98
ABCA3-206ENST00000569062 FBXO43Q4G163 708 aa21.2■□□□□ 0.98
ABCA3-206ENST00000569062 RAB41Q5JT25 222 aa21.2■□□□□ 0.98
ABCA3-206ENST00000569062 LY6G5CQ5SRR4 150 aa21.2■□□□□ 0.98
ABCA3-206ENST00000569062 TMEM270Q6UE05 265 aa21.2■□□□□ 0.98
ABCA3-206ENST00000569062 RRAGAQ7L523 313 aa21.2■□□□□ 0.98
ABCA3-206ENST00000569062 C12orf40Q86WS4 652 aa21.2■□□□□ 0.98
ABCA3-206ENST00000569062 EHBP1Q8NDI1 1231 aa21.2■□□□□ 0.98
ABCA3-206ENST00000569062 RPLP0P6Q8NHW5 317 aa21.2■□□□□ 0.98
ABCA3-206ENST00000569062 EPC1Q9H2F5 836 aa21.2■□□□□ 0.98
ABCA3-206ENST00000569062 PCDHB4Q9Y5E5 795 aa21.2■□□□□ 0.98
ABCA3-206ENST00000569062 GREM1O60565 184 aa21.19■□□□□ 0.98
ABCA3-206ENST00000569062 ATG13O75143 517 aa21.19■□□□□ 0.98
ABCA3-206ENST00000569062 FGFR1OPO95684 399 aaKnown RBP21.19■□□□□ 0.98
ABCA3-206ENST00000569062 VDRP11473 427 aa21.19■□□□□ 0.98
ABCA3-206ENST00000569062 ADH5P11766 374 aa21.19■□□□□ 0.98
ABCA3-206ENST00000569062 BCAT1P54687 386 aa21.19■□□□□ 0.98
ABCA3-206ENST00000569062 MESP2Q0VG99 397 aa21.19■□□□□ 0.98
ABCA3-206ENST00000569062 DCLK2Q8N568 766 aa21.19■□□□□ 0.98
ABCA3-206ENST00000569062 UBA3Q8TBC4 463 aa21.19■□□□□ 0.98
ABCA3-206ENST00000569062 OTUB2Q96DC9 234 aa21.19■□□□□ 0.98
ABCA3-206ENST00000569062 EML5Q05BV3 1969 aa21.19■□□□□ 0.98
ABCA3-206ENST00000569062 PTPRZ1P23471 2315 aaPredicted RBP21.18■□□□□ 0.98
ABCA3-206ENST00000569062 ZNF292O60281 2723 aa21.18■□□□□ 0.98
ABCA3-206ENST00000569062 K7EQS6 105 aa21.18■□□□□ 0.98
ABCA3-206ENST00000569062 O00370 1275 aa21.18■□□□□ 0.98
ABCA3-206ENST00000569062 XPO1O14980 1071 aaKnown RBP21.18■□□□□ 0.98
ABCA3-206ENST00000569062 ADH1CP00326 375 aa21.18■□□□□ 0.98
ABCA3-206ENST00000569062 CALCAP01258 141 aa21.18■□□□□ 0.98
ABCA3-206ENST00000569062 PSEN1P49768 467 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms