RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 KBTBD4Q9NVX7 518 aa16.71■□□□□ 0.27
HERPUD1-215ENST00000568676 A0A087X0B3 334 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 A0A1W2PQD8 194 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 TOP3BO95985 862 aaKnown RBP16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 HOXB2P14652 356 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 GABRG2P18507 467 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 AP3M2P53677 418 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 CACNA2D1P54289 1103 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 ZNF33AQ06730 810 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 CYP24A1Q07973 514 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 IFRD2Q12894 506 aaPredicted RBP16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 ZNF423Q2M1K9 1284 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 C10orf76Q5T2E6 689 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 EPM2AIP1Q7L775 607 aaPredicted RBP16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 FRMD1Q8N878 549 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 SMARCD1Q96GM5 515 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 XPO6Q96QU8 1125 aaKnown RBP16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 PANK2Q9BZ23 570 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 TRIM9Q9C026 710 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 NACA2Q9H009 215 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 DPEP3Q9H4B8 488 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 ZSCAN16Q9H4T2 348 aaPredicted RBP16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 FAM124BQ9H5Z6 455 aaPredicted RBP16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 TMEM30AQ9NV96 361 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 SUSD2Q9UGT4 822 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 RALYQ9UKM9 306 aaKnown RBP16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 NME7Q9Y5B8 376 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 ASPMQ8IZT6 3477 aa16.7■□□□□ 0.26
HERPUD1-215ENST00000568676 ARHGAP33O14559 1287 aa16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 HYAL3O43820 417 aaPredicted RBP16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 ZDHHC11BP0C7U3 371 aa16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 HOXD13P35453 343 aa16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 SLC5A3P53794 718 aa16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 CEBPZQ03701 1054 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 GOLGA8FQ08AF8 430 aa16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 GOLGA8DPQ0D2H9 430 aa16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 ANO4Q32M45 955 aa16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 FAM26FQ5R3K3 315 aa16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 C12orf56Q8IXR9 622 aa16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 PDILTQ8N807 584 aa16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 RDH13Q8NBN7 331 aa16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 CCDC127Q96BQ5 260 aa16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 GTPBP2Q9BX10 602 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 XYLT2Q9H1B5 865 aa16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 FBXO44Q9H4M3 255 aa16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 DNAAF2Q9NVR5 837 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 CALCOCO1Q9P1Z2 691 aa16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 WDR35Q9P2L0 1181 aa16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 ATXN2Q99700 1313 aaKnown RBP16.69■□□□□ 0.26
HERPUD1-215ENST00000568676 ASCC3Q8N3C0 2202 aaKnown RBP16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 GFRA2O00451 464 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 CLDN5O00501 218 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 SCAMP3O14828 347 aaKnown RBP16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 TGFB1I1O43294 461 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 CACNG3O60359 315 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 PHACTR2O75167 634 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 TRIM21P19474 475 aaKnown RBP16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 SYT1P21579 422 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 SYCP2LQ5T4T6 812 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 GRAMD4Q6IC98 578 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 HTR3DQ70Z44 454 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 FAM35AQ86V20 835 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 BBS7Q8IWZ6 715 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 MINDY1Q8N5J2 469 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 NAT16Q8N8M0 369 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 GLIS3Q8NEA6 775 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 FOXJ1Q92949 421 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 KCNK16Q96T55 309 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 MED10Q9BTT4 135 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 MAGEF1Q9HAY2 307 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.68■□□□□ 0.266e-9■■■■■ 134.6
HERPUD1-215ENST00000568676 MARK1Q9P0L2 795 aa16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 NXF1Q9UBU9 619 aaKnown RBP16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 CHORDC1Q9UHD1 332 aaPredicted RBP16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 LSM7Q9UK45 103 aaKnown RBP16.68■□□□□ 0.26
HERPUD1-215ENST00000568676 IGF2RP11717 2491 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 IGHV1OR15-9A0A0B4J2B8 117 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 SPAARA0A1B0GVQ0 90 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 A0A1W2PQF6 199 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 P4HA1P13674 534 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 GNSP15586 552 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 NASPP49321 788 aaPredicted RBP16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 CYP2J2P51589 502 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 ZNF132P52740 706 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 MYL6P60660 151 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 ASIC1P78348 528 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 E2F4Q16254 413 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 ZNF667Q5HYK9 610 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 KIAA1211LQ6NV74 962 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 LRSAM1Q6UWE0 723 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 TMEM25Q86YD3 366 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 CHPFQ8IZ52 775 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 IQUBQ8NA54 791 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 SCAMP5Q8TAC9 235 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 SCFD1Q8WVM8 642 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 USP28Q96RU2 1077 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 GABRG3Q99928 467 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 ZDHHC5Q9C0B5 715 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 CCSER2Q9H7U1 834 aa16.67■□□□□ 0.26
HERPUD1-215ENST00000568676 ZDHHC4Q9NPG8 344 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms