RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 PPM1KQ8N3J5 372 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 TRIML1Q8N9V2 468 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 EHBP1Q8NDI1 1231 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 LMO3Q8TAP4 145 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 UBA3Q8TBC4 463 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 SH3RF2Q8TEC5 729 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 TFAP2BQ92481 460 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 SPOCK2Q92563 424 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 CNOT6LQ96LI5 555 aaKnown RBP10.05□□□□□ -0.8
SF3B3-211ENST00000568291 HNRNPABQ99729 332 aaKnown RBP10.05□□□□□ -0.8
SF3B3-211ENST00000568291 RTKNQ9BST9 563 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 TTLL2Q9BWV7 592 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 C8orf33Q9H7E9 229 aaPredicted RBP10.05□□□□□ -0.8
SF3B3-211ENST00000568291 HPS4Q9NQG7 708 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.05□□□□□ -0.8
SF3B3-211ENST00000568291 CPQQ9Y646 472 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.05□□□□□ -0.8
SF3B3-211ENST00000568291 ANAPC1Q9H1A4 1944 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 SPECC1L-ADORA2AF8WAN1 911 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 LEFTY2O00292 366 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 PIK3R2O00459 728 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 MDM4O15151 490 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 CYP26A1O43174 497 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 COCHO43405 550 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 PAPSS2O95340 614 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-211ENST00000568291 AFPP02771 609 aaKnown RBP10.04□□□□□ -0.8
SF3B3-211ENST00000568291 RETP07949 1114 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 USP17L7P0C7H9 530 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 IRF1P10914 325 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 PPP1R2P41236 205 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 MLLT6P55198 1093 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-211ENST00000568291 SRSF5Q13243 272 aaKnown RBP10.04□□□□□ -0.8
SF3B3-211ENST00000568291 SIM2Q14190 667 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-211ENST00000568291 PON2Q15165 354 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 TPD52L1Q16890 204 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-211ENST00000568291 GOLGA7BQ2TAP0 167 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 ARHGAP29Q52LW3 1261 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 HEATR6Q6AI08 1181 aaKnown RBP10.04□□□□□ -0.8
SF3B3-211ENST00000568291 TMEM270Q6UE05 265 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 RALGPS2Q86X27 583 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-211ENST00000568291 MLKLQ8NB16 471 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 NETO1Q8TDF5 533 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 CNTNAP3BQ96NU0 1288 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 GBP4Q96PP9 640 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 SLITRK1Q96PX8 696 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 FAM83CQ9BQN1 747 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 ZSWIM1Q9BR11 485 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 CNTNAP3Q9BZ76 1288 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 INTS2Q9H0H0 1204 aaKnown RBP10.04□□□□□ -0.8
SF3B3-211ENST00000568291 NMUR1Q9HB89 426 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 FBRSL1Q9HCM7 1045 aaKnown RBP10.04□□□□□ -0.8
SF3B3-211ENST00000568291 CSNK1G1Q9HCP0 422 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 ACP6Q9NPH0 428 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 SAMSN1Q9NSI8 373 aaKnown RBP10.04□□□□□ -0.8
SF3B3-211ENST00000568291 POLR3BQ9NW08 1133 aaPredicted RBP10.04□□□□□ -0.8
SF3B3-211ENST00000568291 THG1LQ9NWX6 298 aaKnown RBP10.04□□□□□ -0.8
SF3B3-211ENST00000568291 OSER1Q9NX31 292 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 CFAP97Q9P2B7 532 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 PCDHB4Q9Y5E5 795 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 ATP8B3O60423 1300 aa10.04□□□□□ -0.8
SF3B3-211ENST00000568291 A0A1W2PQH9 124 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 K7ESF4 209 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 LRP3O75074 770 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 CCDC192P0DO97 292 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 MBL2P11226 248 aaPredicted RBP10.03□□□□□ -0.8
SF3B3-211ENST00000568291 SLC9A1P19634 815 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 DDX6P26196 483 aaKnown RBP eCLIP10.03□□□□□ -0.8
SF3B3-211ENST00000568291 MTIF2P46199 727 aaKnown RBP10.03□□□□□ -0.8
SF3B3-211ENST00000568291 RUNX3Q13761 415 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 MTF1Q14872 753 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 ZNF77Q15935 545 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 DGKKQ5KSL6 1271 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 CC2D1AQ6P1N0 951 aaPredicted RBP10.03□□□□□ -0.8
SF3B3-211ENST00000568291 PRR23CQ6ZRP0 262 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 CEP68Q76N32 757 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 TTC30AQ86WT1 665 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 UBR7Q8N806 425 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 CHFRQ96EP1 664 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 KREMEN1Q96MU8 473 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 NT5C1BQ96P26 610 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 DUSP16Q9BY84 665 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 UBE2TQ9NPD8 197 aaPredicted RBP10.03□□□□□ -0.8
SF3B3-211ENST00000568291 C2orf42Q9NWW7 574 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 DUS2Q9NX74 493 aaKnown RBP10.03□□□□□ -0.8
SF3B3-211ENST00000568291 OBP2AQ9NY56 170 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 IL37Q9NZH6 218 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 AJAP1Q9UKB5 411 aaPredicted RBP10.03□□□□□ -0.8
SF3B3-211ENST00000568291 PTPRDP23468 1912 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 CHD8Q9HCK8 2581 aa10.03□□□□□ -0.8
SF3B3-211ENST00000568291 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.02□□□□□ -0.81
SF3B3-211ENST00000568291 SLC30A4O14863 429 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 HRO43593 1189 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 RTN3O95197 1032 aaPredicted RBP10.02□□□□□ -0.81
SF3B3-211ENST00000568291 GNA14O95837 355 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 OAS1P00973 400 aaKnown RBP10.02□□□□□ -0.81
SF3B3-211ENST00000568291 BRD2P25440 801 aaKnown RBP10.02□□□□□ -0.81
SF3B3-211ENST00000568291 WEE1P30291 646 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 RGS7P49802 495 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 KIF11P52732 1056 aa10.02□□□□□ -0.81
SF3B3-211ENST00000568291 MARSP56192 900 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms