RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 ARRDC1-AS1Q9H2J1 176 aa12.92□□□□□ -0.34
GTF3C1-208ENST00000567843 SMOC1Q9H4F8 434 aa12.92□□□□□ -0.34
GTF3C1-208ENST00000567843 CYP3A43Q9HB55 503 aa12.92□□□□□ -0.34
GTF3C1-208ENST00000567843 NMUR1Q9HB89 426 aa12.92□□□□□ -0.34
GTF3C1-208ENST00000567843 SEMA4GQ9NTN9 838 aa12.92□□□□□ -0.34
GTF3C1-208ENST00000567843 OSER1Q9NX31 292 aa12.92□□□□□ -0.34
GTF3C1-208ENST00000567843 DLL3Q9NYJ7 618 aa12.92□□□□□ -0.34
GTF3C1-208ENST00000567843 PCDHA5Q9Y5H7 936 aa12.92□□□□□ -0.34
GTF3C1-208ENST00000567843 MYOFQ9NZM1 2061 aa12.92□□□□□ -0.34
GTF3C1-208ENST00000567843 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 A0A1W2PQH9 124 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 HHLA1C9JL84 531 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 SLC9A3R1O14745 358 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 TRIM24O15164 1050 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 GDF9O60383 454 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 TLR5O60602 858 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 CILPO75339 1184 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 EPB41P11171 864 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 ADH5P11766 374 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 HOXA6P31267 233 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 TIE1P35590 1138 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 DGKEP52429 567 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 ATXN1P54253 815 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 LMNB2Q03252 620 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 LRMPQ12912 555 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 ANO4Q32M45 955 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 EDRF1Q3B7T1 1238 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 PPP1R26Q5T8A7 1209 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 ZNF658Q5TYW1 1059 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 ANKRD40Q6AI12 368 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 SYT13Q7L8C5 426 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 ERMP1Q7Z2K6 904 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 TMEM25Q86YD3 366 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 GPR161Q8N6U8 529 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 ENGASEQ8NFI3 743 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 TSTD1Q8NFU3 115 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 USP33Q8TEY7 942 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 GAB3Q8WWW8 586 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 SMARCE1Q969G3 411 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 ERLEC1Q96DZ1 483 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 HEXIM2Q96MH2 286 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 PNKPQ96T60 521 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 CSNK1G1Q9HCP0 422 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 ARHGEF4Q9NR80 690 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 TLR8Q9NR97 1041 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 RMND1Q9NWS8 449 aa12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 CDV3Q9UKY7 258 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-208ENST00000567843 CNOT1A5YKK6 2376 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 E2F8A0AVK6 867 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 FAM92AA1XBS5 289 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 KAT7O95251 611 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 SMC2O95347 1197 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 APBB3O95704 486 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 ADH1CP00326 375 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 HNRNPLP14866 589 aaKnown RBP eCLIP12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 NUCB2P80303 420 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 SF3A2Q15428 464 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 CBWD6Q4V339 395 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 CBWD3Q5JTY5 395 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 CBWD5Q5RIA9 395 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 SNX30Q5VWJ9 437 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 ANO7Q6IWH7 933 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 CACNA2D4Q7Z3S7 1137 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 DDX42Q86XP3 938 aaKnown RBP eCLIP12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 CAMKK1Q8N5S9 505 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 ALLCQ8N6M5 410 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 FBXL13Q8NEE6 735 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 ACDQ96AP0 544 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 TSG101Q99816 390 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 FBXO44Q9H4M3 255 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 CISHQ9NSE2 258 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 COMMD8Q9NX08 183 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 RAB20Q9NX57 234 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 TBC1D14Q9P2M4 693 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 NAGPAQ9UK23 515 aa12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 CIZ1Q9ULV3 898 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-208ENST00000567843 SGK1O00141 431 aa12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 KLF8O95600 359 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 APODP05090 189 aa12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 RARGP13631 454 aa12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 CD44P16070 742 aaKnown RBP12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 TRIM21P19474 475 aaKnown RBP12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 GBP1P32455 592 aa12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 GTF2H1P32780 548 aa12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 WASP42768 502 aa12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 GAD2Q05329 585 aa12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 TMEM92Q6UXU6 159 aa12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 PRR23CQ6ZRP0 262 aa12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 TPGS1Q6ZTW0 290 aa12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 SLC4A11Q8NBS3 891 aa12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 TXNDC5Q8NBS9 432 aaKnown RBP12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 BHMTQ93088 406 aa12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 GSDMAQ96QA5 445 aa12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 KLF16Q9BXK1 252 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 RXFP3Q9NSD7 469 aa12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 SCML2Q9UQR0 700 aa12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 MYH10P35580 1976 aa12.89□□□□□ -0.35
GTF3C1-208ENST00000567843 TPRP12270 2363 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 HELZP42694 1942 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-208ENST00000567843 GON4LQ3T8J9 2241 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms