RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 CADPSQ9ULU8 1353 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 LOC102723971A0A1B0GUV8 181 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 H3BML4 177 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 H7C4K7 107 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 M0R3H8 397 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 CLIC1O00299 241 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 PHGDHO43175 533 aaKnown RBP4.02□□□□□ -1.77
CDH1-211ENST00000567320 SPRY2O43597 315 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 TLR2O60603 784 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 TULP3O75386 442 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 HGFP14210 728 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 YY1P25490 414 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 TACR3P29371 465 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 PTDSS1P48651 473 aaKnown RBP4.02□□□□□ -1.77
CDH1-211ENST00000567320 HTR6P50406 440 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 GATMP50440 423 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 PGDP52209 483 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 ARFIP2P53365 341 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 TIRAPP58753 221 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 PFKFB3Q16875 520 aaPredicted RBP4.02□□□□□ -1.77
CDH1-211ENST00000567320 DAB2IPQ5VWQ8 1189 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 MEPCEQ7L2J0 689 aaKnown RBP4.02□□□□□ -1.77
CDH1-211ENST00000567320 ARFGAP1Q8N6T3 406 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 C11orf44Q8N8P7 122 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.02□□□□□ -1.77
CDH1-211ENST00000567320 THOC3Q96J01 351 aaKnown RBP4.02□□□□□ -1.77
CDH1-211ENST00000567320 STK31Q9BXU1 1019 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 TRIM5Q9C035 493 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 NKX1-2Q9UD57 310 aaPredicted RBP4.02□□□□□ -1.77
CDH1-211ENST00000567320 ZNF180Q9UJW8 692 aa4.02□□□□□ -1.77
CDH1-211ENST00000567320 PIAS2O75928 621 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 CTSAP10619 480 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 ZKSCAN1P17029 563 aaPredicted RBP4.01□□□□□ -1.77
CDH1-211ENST00000567320 THBS3P49746 956 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 SLC14A1Q13336 389 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 NPY5RQ15761 445 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 LEXMQ3ZCV2 418 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 LVRNQ6Q4G3 990 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 ZNF793Q6ZN11 406 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 ZBTB34Q8NCN2 500 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 OR56A3Q8NH54 315 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 SMCR8Q8TEV9 937 aaPredicted RBP4.01□□□□□ -1.77
CDH1-211ENST00000567320 JPH3Q8WXH2 748 aaPredicted RBP4.01□□□□□ -1.77
CDH1-211ENST00000567320 VPS50Q96JG6 964 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 LYZL4Q96KX0 146 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 TRMOQ9BU70 441 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 HIPK2Q9H2X6 1198 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 ARL8BQ9NVJ2 186 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 PNMA8BQ9ULN7 279 aaPredicted RBP4.01□□□□□ -1.77
CDH1-211ENST00000567320 PAXBP1Q9Y5B6 917 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 FER1L4A9Z1Z3 1794 aa4.01□□□□□ -1.77
CDH1-211ENST00000567320 FAM90A8PA6NJQ4 464 aa4□□□□□ -1.77
CDH1-211ENST00000567320 RAB27BO00194 218 aa4□□□□□ -1.77
CDH1-211ENST00000567320 FYB1O15117 783 aa4□□□□□ -1.77
CDH1-211ENST00000567320 CD3EAPO15446 510 aaKnown RBP4□□□□□ -1.77
CDH1-211ENST00000567320 CD63P08962 238 aa4□□□□□ -1.77
CDH1-211ENST00000567320 FAM90A13PP0C7W8 464 aa4□□□□□ -1.77
CDH1-211ENST00000567320 FAM90A24PP0C7X0 464 aa4□□□□□ -1.77
CDH1-211ENST00000567320 T-ENOLP0DO92 83 aa4□□□□□ -1.77
CDH1-211ENST00000567320 BRAFP15056 766 aa4□□□□□ -1.77
CDH1-211ENST00000567320 CD19P15391 556 aa4□□□□□ -1.77
CDH1-211ENST00000567320 EN2P19622 333 aaPredicted RBP4□□□□□ -1.77
CDH1-211ENST00000567320 CDKN2AP42771 156 aaKnown RBP4□□□□□ -1.77
CDH1-211ENST00000567320 SUMO3P55854 103 aaPredicted RBP4□□□□□ -1.77
CDH1-211ENST00000567320 CFHR3Q02985 330 aa4□□□□□ -1.77
CDH1-211ENST00000567320 PTPROQ16827 1216 aa4□□□□□ -1.77
CDH1-211ENST00000567320 ZNF750Q32MQ0 723 aa4□□□□□ -1.77
CDH1-211ENST00000567320 ANO6Q4KMQ2 910 aa4□□□□□ -1.77
CDH1-211ENST00000567320 ZNF549Q6P9A3 640 aa4□□□□□ -1.77
CDH1-211ENST00000567320 COL23A1Q86Y22 540 aaPredicted RBP4□□□□□ -1.77
CDH1-211ENST00000567320 TPH2Q8IWU9 490 aa4□□□□□ -1.77
CDH1-211ENST00000567320 C12orf76Q8N812 135 aaPredicted RBP4□□□□□ -1.77
CDH1-211ENST00000567320 FAM71DQ8N9W8 422 aa4□□□□□ -1.77
CDH1-211ENST00000567320 SMRP1Q8NCR6 262 aa4□□□□□ -1.77
CDH1-211ENST00000567320 SLC35G2Q8TBE7 412 aa4□□□□□ -1.77
CDH1-211ENST00000567320 CTHRC1Q96CG8 243 aa4□□□□□ -1.77
CDH1-211ENST00000567320 SUCLG2Q96I99 432 aa4□□□□□ -1.77
CDH1-211ENST00000567320 SCNM1Q9BWG6 230 aa4□□□□□ -1.77
CDH1-211ENST00000567320 SMURF2Q9HAU4 748 aa4□□□□□ -1.77
CDH1-211ENST00000567320 XPNPEP3Q9NQH7 507 aa4□□□□□ -1.77
CDH1-211ENST00000567320 CFAP69A5D8W1 941 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 PYCARD-AS1I3L0S3 204 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 TBX3O15119 743 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 RRP9O43818 475 aaKnown RBP3.99□□□□□ -1.77
CDH1-211ENST00000567320 CTNND1O60716 968 aaKnown RBP3.99□□□□□ -1.77
CDH1-211ENST00000567320 SNX2O60749 519 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 ALDH1L1O75891 902 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 SYF2O95926 243 aaKnown RBP3.99□□□□□ -1.77
CDH1-211ENST00000567320 CDC25AP30304 524 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
CDH1-211ENST00000567320 HSF1Q00613 529 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 CFHR1Q03591 330 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 MTX1Q13505 466 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 ARHGEF7Q14155 803 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 SLC29A2Q14542 456 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 KPNB1Q14974 876 aaKnown RBP3.99□□□□□ -1.77
CDH1-211ENST00000567320 FAM110CQ1W6H9 321 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 NPNTQ6UXI9 565 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 DEF8Q6ZN54 512 aa3.99□□□□□ -1.77
CDH1-211ENST00000567320 C9orf47Q6ZRZ4 202 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms