RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 TTLL2Q9BWV7 592 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 B3GNT5Q9BYG0 378 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 ZNF518BQ9C0D4 1074 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 XYLT2Q9H1B5 865 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 SMYD3Q9H7B4 428 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 DMAP1Q9NPF5 467 aaPredicted RBP11□□□□□ -0.65
LINC00564-201ENST00000567258 HPS4Q9NQG7 708 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 RMND1Q9NWS8 449 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 USP18Q9UMW8 372 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 ARHGAP26Q9UNA1 814 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 MAPK8IP1Q9UQF2 711 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 TRAF3IP3Q9Y228 551 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 WNT6Q9Y6F9 365 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 DMXL1Q9Y485 3027 aa11□□□□□ -0.65
LINC00564-201ENST00000567258 ZNF840PA6NDX5 716 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 STX10O60499 249 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 AP1G2O75843 785 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 PAPSS2O95340 614 aaPredicted RBP10.99□□□□□ -0.65
LINC00564-201ENST00000567258 TCF3P15923 654 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 GJA4P35212 333 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 RAP1GAPP47736 663 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 GALK1P51570 392 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 DLG4P78352 724 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 DPYDQ12882 1025 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 USP4Q13107 963 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 ADAM9Q13443 819 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 LPAL2Q16609 132 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 ZACNQ401N2 412 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 SV2AQ7L0J3 742 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 ACOT1Q86TX2 421 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 FAM35AQ86V20 835 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 UNC93AQ86WB7 457 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 FAM186BQ8IYM0 893 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 GUF1Q8N442 669 aaKnown RBP10.99□□□□□ -0.65
LINC00564-201ENST00000567258 ACDQ96AP0 544 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 TSG101Q99816 390 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 FBXO44Q9H4M3 255 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 MMRN2Q9H8L6 949 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 COMMD8Q9NX08 183 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 GCNT4Q9P109 453 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 ZDHHC9Q9Y397 364 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 KIAA1549LQ6ZVL6 1849 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 EML5Q05BV3 1969 aa10.99□□□□□ -0.65
LINC00564-201ENST00000567258 DMDP11532 3685 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 FAM237AA0A1B0GTK4 181 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 PRR5-ARHGAP8B1AHC4 643 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 LEFTY2O00292 366 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 SMC2O95347 1197 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 VNN1O95497 513 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 HLA-DRAP01903 254 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 CCDC192P0DO97 292 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 EPB41P11171 864 aaKnown RBP10.98□□□□□ -0.65
LINC00564-201ENST00000567258 NDST1P52848 882 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 NUCB2P80303 420 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 SLC7A9P82251 487 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 ARHGAP8P85298 464 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 LMNB2Q03252 620 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 GOLGA8FQ08AF8 430 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 GOLGA8DPQ0D2H9 430 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 GAS6Q14393 721 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 PUM1Q14671 1186 aaKnown RBP eCLIP10.98□□□□□ -0.65
LINC00564-201ENST00000567258 NFIL3Q16649 462 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 EML3Q32P44 896 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 HECTD3Q5T447 861 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 FSTL4Q6MZW2 842 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 DGLUCYQ7Z3D6 616 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 KIAA1958Q8N8K9 716 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 PLEKHO2Q8TD55 490 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 GTPBP4Q9BZE4 634 aaKnown RBP10.98□□□□□ -0.65
LINC00564-201ENST00000567258 GDPD2Q9HCC8 539 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 KRT82Q9NSB4 513 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 SMPD4Q9NXE4 827 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 TBC1D14Q9P2M4 693 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 SH3BP1Q9Y3L3 701 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 CPQQ9Y646 472 aa10.98□□□□□ -0.65
LINC00564-201ENST00000567258 MYO18AQ92614 2054 aaKnown RBP10.97□□□□□ -0.65
LINC00564-201ENST00000567258 OTOL1A6NHN0 477 aaPredicted RBP10.97□□□□□ -0.65
LINC00564-201ENST00000567258 CETN3O15182 167 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 FOXD2O60548 495 aaPredicted RBP10.97□□□□□ -0.65
LINC00564-201ENST00000567258 ADH1CP00326 375 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 ASS1P00966 412 aaKnown RBP10.97□□□□□ -0.65
LINC00564-201ENST00000567258 EGFP01133 1207 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 RETP07949 1114 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 CCNYL3P0C7X3 344 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 FAM200BP0CF97 657 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 TDGF1P13385 188 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 HOXA6P31267 233 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 GCLMP48507 274 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 SLC5A3P53794 718 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 ENPEPQ07075 957 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 STIM1Q13586 685 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 PREPLQ4J6C6 727 aaPredicted RBP10.97□□□□□ -0.65
LINC00564-201ENST00000567258 WDR44Q5JSH3 913 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 BTBD8Q5XKL5 378 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 FILIP1Q7Z7B0 1213 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 WDR5BQ86VZ2 330 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 TTC39CQ8N584 583 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 CAMKK1Q8N5S9 505 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 RPLP0P6Q8NHW5 317 aa10.97□□□□□ -0.65
LINC00564-201ENST00000567258 CHFRQ96EP1 664 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms